Gene Rsph17025_2838 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_2838 
Symbol 
ID5084216 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp2891725 
End bp2893320 
Gene Length1596 bp 
Protein Length531 aa 
Translation table11 
GC content67% 
IMG OID640484408 
ProductFAD dependent oxidoreductase 
Protein accessionYP_001169029 
Protein GI146278870 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1233] Phytoene dehydrogenase and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.320797 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.430895 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCCGC CGTATGATGC GATCATCGTG GGCGGCGGCC ACAACGGGCT GACCTGCGGC 
GCCTATCTCG CGCGCGCGGG CGTGAAGGTG CTGGTGGTGG AACGTCAGCC TGTCGTCGGC
GGCGCGGCGG TGACGGGCGA GATCGCGCCC GGCTACCGCA GTTCGCTCGC CTCCTATTAT
CAGGGGCTTC TGCAGCCGAA GGTCATCCTC GATCTCGAAT TGCAGAAACA CGGCTTCGAG
GTGATCCCCG CCGCGCCCAC GGTGTTCGCG CTCGAGGGCG GGCGCACCTT CACGATGTGG
GACGATCCGG AGCGGTTCGC GGCCGAGATC GCCAGATTCT CGAATGTCGA TGGCGCGGCC
TATGCCGGCT ATCGCGCGCA CATGCTGAAG ATCGCGCCGC ACATGAAGCA GCTTCTGTGG
GAGGTGCCGG TCGATCCCGC CAGCGGCAAG ATCCGGGACC TGAAGCGGCT CGCGGGCTTC
GTCTGGCGTT TCCGCAAGGT CGGGCCGCAA TTCTACGACA TCTACAATCT CCTCACGATG
AGCGCCTGGG ACTATCTCTC GCGCTGGTTC ACCTCCGACG AGGTGAAGCT GGTCCTGGGC
TTCTTCGCCG GCGGGGGCGG GGCCAATTCC AGCCTGAAGA CACCCGGTTC GGCCTATATG
CTCGCGCGCG GCATCGTGCG CGACGGCGGC ACCGCCGCGG GGCCCGCCGG CTTCATGAAG
GGCGGGATGG GCGCCATTTC CGACGCGATC CGCCGCTCGG GCGAGGCGCA TGGCATGGAG
GTGCGCACCT CCTGCCCGGT GGAGAGGATC CTTGTCGAGA ACGGCCGCGC CACGGGGGTG
CGGCTGGAGG GCGGCGAGGA GATCCGCTCG AAGATCGTGA TCGCCAATGC CACCGCCCGG
ACGACCTTCA CGAAGCTCCT CGATCCCGCC GAGCTTCCCG AAGAGTTCAA CCGCGACATC
CGCAACATCC GCTGCGAAAG CACGGTCTTC CGGGTCAATC TGGCGCTGTC GGCGCTGCCT
GAGGCCCCGG TTTTCGGCCA GACCAATCCG CAGGGGTCCA TCGTGCCCCA GATGACCATC
GCGCCGAACG TGGCCTACAT GGAGCGCGCC TGGCATCAGG CGCAGGGCGG CGAGATCGCC
GAGGCGCCCT TCCTGATCGT CAAGGTCCCC TCGATCGTCG ATCCGACGCT CGCGCCCGAG
GGCCATCACA TCATGAATGT CTTCGGCGGT CATGCGCCCT ACACGCTCGC GCGGGGCGAC
TGGGACAGCT GCCGCGAGGA GCTGTGGGGC CGGGCGCTGG CCGTGCTGAA GAGCCAGTTC
CCGGACATCG AGGACAAGAT CCTGCATCGC CAGATCCTGA CGCCGCTGGA CCTCGAGCGG
ATCTTCGATC TGCCGAACGG CCATGTCCAT CACGGCGAGA TCAGCGCGGA CCAGATGTTC
TTCCGCCGTC CTTCGCCGCA GTTCGCCGAC TACCGCAGCC CGGTGGACCG TCTCTATCAT
GCCTCGGCCT CGGTCCATCC CGGCGGCGGC GTGACCGGCG TGCCGGGGCA CAATGCGGCG
AAGGTCATCC TCGAAGACCG GCGGAAATGG AGCTGA
 
Protein sequence
MSPPYDAIIV GGGHNGLTCG AYLARAGVKV LVVERQPVVG GAAVTGEIAP GYRSSLASYY 
QGLLQPKVIL DLELQKHGFE VIPAAPTVFA LEGGRTFTMW DDPERFAAEI ARFSNVDGAA
YAGYRAHMLK IAPHMKQLLW EVPVDPASGK IRDLKRLAGF VWRFRKVGPQ FYDIYNLLTM
SAWDYLSRWF TSDEVKLVLG FFAGGGGANS SLKTPGSAYM LARGIVRDGG TAAGPAGFMK
GGMGAISDAI RRSGEAHGME VRTSCPVERI LVENGRATGV RLEGGEEIRS KIVIANATAR
TTFTKLLDPA ELPEEFNRDI RNIRCESTVF RVNLALSALP EAPVFGQTNP QGSIVPQMTI
APNVAYMERA WHQAQGGEIA EAPFLIVKVP SIVDPTLAPE GHHIMNVFGG HAPYTLARGD
WDSCREELWG RALAVLKSQF PDIEDKILHR QILTPLDLER IFDLPNGHVH HGEISADQMF
FRRPSPQFAD YRSPVDRLYH ASASVHPGGG VTGVPGHNAA KVILEDRRKW S