| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_2763 |
|---|
| Symbol | |
|---|
| ID | 5085116 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17025 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009428 |
|---|
| Strand | + |
|---|
| Start bp | 2807643 |
|---|
| End bp | 2809142 |
|---|
| Gene Length | 1500 bp |
|---|
| Protein Length | 499 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640484326 |
|---|
| Product | OmpA/MotB domain-containing protein |
|---|
| Protein accession | YP_001168955 |
|---|
| Protein GI | 146278796 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.621533 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGTGA AGGGGTGGCA CGCGGCCTGT CTCGCCGCGC TTTTCTGGCT GGCCGGATCG
GCCTCAGCGC AGGACATCAC CCTCACGTCG CGCAGCGGCG CCATCACGCT TGAGGGAACA
CTGCTCGGCT TCGACGGCGA ATTCTACCGG ATCGGGACGA AGTACGGGCC GCTGACGGTG
GATTCGGCGG GTGTCACCTG CTCGGGGCCA GAATGCCCCG AACTGGTCGC GCCGCTGGCC
GAGATCCGGA TCCTCGGGGC GACCGAGGCG GGACATGGCC TGCTGCCCCG ACTTTTGCGG
GCGCAGGCCG AGGCGCGCGG CTATGCCCTC CGGTCCTTGA AGGCGGAGGC AGGTTTCGCG
ACCGAGGTTC TGGACGGAAA GGGCGCTCCC GTGGCGCGGG TGAGCTTCAC GCCAGCCACC
CCGGCAAAGG CTGCCGAGGC GCTCGCCTCC GGCGCGGCCG ACCTGGTGAT CACGGCCCAT
GCGGATCCCG AGATGACGAC CCGGGTGCTG GCCCTCGACG CTCTGGTGCC GATCGTGGCG
ACCGACAATC CGTTGCCGCG CATATCCACC CGCGATCTCG CGCGCGCGCT GTCGGGAGAG
GTGAAGAACT GGAAAGACCT CGGCGGGCCT GACATGCCGC TCGTGCTCCA TGCGCTGGCG
CGCGACATCA GCCTTGAGGC CGCGCTCGAG GCGCGGCTCG GCCGGCCCAT TGCGGCAAGC
GTCACCCATG GCGATCTGGC GAGCCTTGCC GCCGGCGTGG CCCGTGATCC TTATGCGCTC
GCAATTACGG GGCTCACGGC GCAGGGCCGG GCGCGGGCGC TGCCTCTGAC CGACAGCTGC
GGCTTTCCCC TCCTCCCCTC GCCGCTCGCG GTGAAATCAG AGGACTACCC GCTCTCCCTT
CCGGTCTTTC TGGTGACTCC GCGTCGTCGC CTCCCGCTTT TTGCGCGCGA GTTCCTGGAG
TTTCTTTCGA CGGCGCCGGC CCAGCGTGCG GTGGCTGAAG CGGGCTTCGT GGATCGTCGG
CCAAGCCGCG TGCCGCTCGT GTCCGACGGG CAGAGGTTGA TGAACGCGAT CCGCGTGGCG
GGCGAAGAGG TCCCGCTTGC GGAACTCAAA CGGCTGACCG GCCTGATGGC CGGCGCCGAG
CGCCTGTCGA TCACCTTCCG CTTCGAGGAG GGCGGCAACA AGCTGGAGGC ACAGAGCCGT
GAGGCCCTGA CGGACCTCGT GAAGCTGGTG GAGGTCGGCC GCTTCCGGGA CCAGCAGCTG
ATGCTGGTCG GATTTTCCGA TGGACGCGGG TCGGCCGAGG CGAACCTCTC CCTCTCGCGC
GATCGGGCAG CAACCGTGGC GAGGGCGCTG CAGGAGGCCG CCCCCGATCT TGCACCGCCG
CTCGTCGAAG GGTTCGGCGA AGCCCTTCCC CTGGCCTGCG ATACGACCGT GGCCGGGCGG
CGCATGAACC GGCGGGTGGA GCTGTGGCTT CGGCCGCTCA CAGGTAGCCC TGGGCCCTGA
|
|---|
| Protein sequence | MAVKGWHAAC LAALFWLAGS ASAQDITLTS RSGAITLEGT LLGFDGEFYR IGTKYGPLTV
DSAGVTCSGP ECPELVAPLA EIRILGATEA GHGLLPRLLR AQAEARGYAL RSLKAEAGFA
TEVLDGKGAP VARVSFTPAT PAKAAEALAS GAADLVITAH ADPEMTTRVL ALDALVPIVA
TDNPLPRIST RDLARALSGE VKNWKDLGGP DMPLVLHALA RDISLEAALE ARLGRPIAAS
VTHGDLASLA AGVARDPYAL AITGLTAQGR ARALPLTDSC GFPLLPSPLA VKSEDYPLSL
PVFLVTPRRR LPLFAREFLE FLSTAPAQRA VAEAGFVDRR PSRVPLVSDG QRLMNAIRVA
GEEVPLAELK RLTGLMAGAE RLSITFRFEE GGNKLEAQSR EALTDLVKLV EVGRFRDQQL
MLVGFSDGRG SAEANLSLSR DRAATVARAL QEAAPDLAPP LVEGFGEALP LACDTTVAGR
RMNRRVELWL RPLTGSPGP
|
|---|
| |