Gene Rsph17025_2676 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_2676 
Symbol 
ID5084464 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp2716247 
End bp2716906 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content66% 
IMG OID640484239 
Productimport inner membrane translocase, subunit Tim44 
Protein accessionYP_001168868 
Protein GI146278709 
COG category[S] Function unknown 
COG ID[COG4395] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.458481 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.659475 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTCGT CCCTGATCCA ACTGCTGGTG CTGGCCGGGA TCGCCGTCTT TCTGATCATC 
AAGCTCAAGA GTGTTCTGGG CACCCGCGAG GGGTTCGAGA AGCCTCCGGT GCCGCTGGAA
GACCCCAGGC CGCGGCCACG GCGTGAGTTC GAGGTGATCG AGGGCGGACC CGACCGCGAC
ATCATCGACC ACGTGACCGA CGGCAGCCCC TCCGCGAAGG CGCTCGCCGG CATGAAGATG
GCCGAGCCGG GCTTTTCGGT GTCGGAATTC CTCACCGGCG CCCGCGGGGC CTATGAAATG
ATCGTGATGG CCTTCGAGAA GGGCGAGCTG GAGCAGATCC GGCCCTTCCT CTCGGCCGAG
GTGTTCGAAA GCTTCGAGGA TGCCGTCAAC GCCCGCGAGG CCGAGGGGCT GAGCGTCGAG
GCGAACTTCC TCGGCCTGCG CGAGATCGAC ATCCACGAGG CCTCCTTCGA ACGCGACTCG
CGGATCGGGC AGATCGCCGT CCGCTTCGTG GGCGAGCTGA CGTCGGTCGT GCGCAATCGC
GAGGGCCAGG TCGTCGAGGG CAGCCCCACC GAGATCAAGC GTCAGCGCGA CGTCTGGACC
TTCGAGCGGC ACATGGGCGC GAACGATCCC AACTGGCAAC TCGTCGCCAC CGGGGAGTGA
 
Protein sequence
MSSSLIQLLV LAGIAVFLII KLKSVLGTRE GFEKPPVPLE DPRPRPRREF EVIEGGPDRD 
IIDHVTDGSP SAKALAGMKM AEPGFSVSEF LTGARGAYEM IVMAFEKGEL EQIRPFLSAE
VFESFEDAVN AREAEGLSVE ANFLGLREID IHEASFERDS RIGQIAVRFV GELTSVVRNR
EGQVVEGSPT EIKRQRDVWT FERHMGANDP NWQLVATGE