| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_2507 |
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| Symbol | |
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| ID | 5084858 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009428 |
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| Strand | - |
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| Start bp | 2556689 |
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| End bp | 2558074 |
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| Gene Length | 1386 bp |
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| Protein Length | 461 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640484069 |
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| Product | protease Do |
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| Protein accession | YP_001168700 |
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| Protein GI | 146278541 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0254484 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCAGG CCTTGCTTGC CCTCCTTTTG ACCGCCGCCC TGTTTCCCCT GCCGATTCTG
GCCGAGACAC GGATCCCGCA AAGCGCGGCC GAGATCTCGC TGACCTTTGC CCCGGTTGTC
CGGTCGGCGG CCCCGGCGGT GGTGAACATC TACGCCACGC GCGTTGTGGC CCAGCGGGTG
AGCCCCTTTG CGGCCGACCC GTTCTTCGAC CAGTTGTTCC GTGACTTCGG ACGCCGCCAG
CCGCGGGTTC AGAACTCGCT CGGCTCGGGC GTGATTGTAG CCGCGGACGG CATCGTGGTG
TCGAACTACC ATGTCGTCGG GCAGGCCGAT GCGATCCGTG TCGTGCTGAA CGACCGCCGC
GAGTATGAGG CCGAGGTGAT GCTGTCCGAT CAGGACAGCG ATCTTGCCGT GCTGAAGCTG
AGGGATGCGC ACGATCTGCC CTATCTGTCG CTGCGCGATT CGGACGGGAT CGAGGTGGGC
GAACTGGTGC TCGCGATCGG CAACCCGTTC GGCGTGGGCC AGACGGTGTC GCAGGGAATC
GTCTCGGGGC TTGCGCGGTC GGGCCTTTCG ATCGACGGCG GGCGGGGCTA CTTCATCCAG
ACCGACGCGG CCATCAATCC CGGCAACTCG GGCGGGGCGC TGGTCGATAC GGCCGGAAGG
CTCGTAGGCA TCAACACCGC GATCCTCACC CAGTCGGGCG GGTCGAACGG GATCGGCTTC
GCCATCCCCG CCAACCTGGT GCGCAGCTTC CTGGCGCAGG CCGCGGCGGG CGAGAGCCGC
TTTCAGCGCC CGTGGGCGGG GGTGAACGGG CAGGTGGTCG ATGCGGCGAT GGCCGAGGCG
ATGGGGCTCG AGCGGCCCGA GGGAGTCGTC CTGACCGAAC TCGATCCCGA AAGCCCGTTC
CGCGCGGCGG GCCTGCGCTC GGGTGATGTG GTGGTGGCGC TTGGCGGCCA GCGGACGGAC
AGTCCGCAGG AGGTGATGTT CCGCCTGTCC TCCATGGGGA TCGGCTCGCG CACCACGGTC
ACCTATCTGC GCGACGGCCA GACGCGCGAG GCCGAGGTTG CGCTGATGGC GCCGCCCGAC
AATCCCCCGC GTGAGACGCT GACGCTGCGC GAGACGGCGC TTGCGGGCCT CACGGTCGAG
CGGCTGAACC CGGCCGTCCG GGCCGAGATG AACCTGCCGC TGACGCTGGA AGGTGTCGTG
GTGCGGGGCG CCGAGGCGCA CGCGGCGCGG GCCGGGCTCC GGCCGGGCGA TCTCCTTCTG
GAGATCAACG GCCGCCGCAT CGAGCGGTCG CGCGATGTGC TGGTGGCGGC GCGGGCACAG
TCGCGCTGGT GGCAGATCGA CGTGCTGCGC GACGGCCAGT CGCTGCGTCT CCGCTTCCGT
CTGTAG
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| Protein sequence | MRQALLALLL TAALFPLPIL AETRIPQSAA EISLTFAPVV RSAAPAVVNI YATRVVAQRV
SPFAADPFFD QLFRDFGRRQ PRVQNSLGSG VIVAADGIVV SNYHVVGQAD AIRVVLNDRR
EYEAEVMLSD QDSDLAVLKL RDAHDLPYLS LRDSDGIEVG ELVLAIGNPF GVGQTVSQGI
VSGLARSGLS IDGGRGYFIQ TDAAINPGNS GGALVDTAGR LVGINTAILT QSGGSNGIGF
AIPANLVRSF LAQAAAGESR FQRPWAGVNG QVVDAAMAEA MGLERPEGVV LTELDPESPF
RAAGLRSGDV VVALGGQRTD SPQEVMFRLS SMGIGSRTTV TYLRDGQTRE AEVALMAPPD
NPPRETLTLR ETALAGLTVE RLNPAVRAEM NLPLTLEGVV VRGAEAHAAR AGLRPGDLLL
EINGRRIERS RDVLVAARAQ SRWWQIDVLR DGQSLRLRFR L
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