Gene Rsph17025_2457 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_2457 
Symbol 
ID5084846 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp2507545 
End bp2508252 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content68% 
IMG OID640484019 
ProductAzlC family protein 
Protein accessionYP_001168650 
Protein GI146278491 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1296] Predicted branched-chain amino acid permease (azaleucine resistance) 
TIGRFAM ID[TIGR00346] 4-azaleucine resistance probable transporter AzlC 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.201604 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.404255 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCATCC GACGTTCCGC CTTCCTGCGC GGCCTCTGGG CTGCCCTGCC CTTCTCGCTG 
GTGATCGCGC CCTTCGGGCT CCTGTTCGGC GTGGTCGGCA CCGAGGCCGG CCTCGACATC
GTCGAAGTCA TGGGCTTTTC CATCATCGTC ATCGCGGGCG CGGCCCAGTT CGCGGCCGTG
CAGATGATGG CCGACCATGC GCCGACGCTG ATCATTCTCG CCACCTCGCT GGCGGTGAAC
CTGCGGATGG CGATGTATTC GGCCTCGCTC ACGCCCCATC TGGGCAAGGC CCCCACCGGG
ATGCGGGCGC TGATCGCCTA TTGCCTCGTG GACCAGACCT ACGCCGCCTC GATGATCGAA
TACGAGCGGA ACCCGCAGCA GAGCCTCGGA GAGAAGGTCG CCTTCTTCTT CGGCACCGTG
CTGCCGATCT GCCCGCTGTG GTATGCGGCA ACCTATGCCG GCGCCAAGCT CGGCACCCGG
ATCCCGCCCG AGTTCGCACT TGATTTCGCG GTGCCGATCA CCTTCCTGGC CATGATCGCG
CCGCTGTTGC GCACGCCGGC CCATATCGCC GCGGCCGGCG TGTCGGTGGC CCTGTCGCTG
GCGCTGGCCT TCATTCCCTA CAACGGCGGA CTTCTGGTGG CCGCGCTGGT CGCGATGGTG
ACGGGGGCGC AGGTGGAGGC CTGGACGGAA CGGAGGCGCG TCGCATGA
 
Protein sequence
MSIRRSAFLR GLWAALPFSL VIAPFGLLFG VVGTEAGLDI VEVMGFSIIV IAGAAQFAAV 
QMMADHAPTL IILATSLAVN LRMAMYSASL TPHLGKAPTG MRALIAYCLV DQTYAASMIE
YERNPQQSLG EKVAFFFGTV LPICPLWYAA TYAGAKLGTR IPPEFALDFA VPITFLAMIA
PLLRTPAHIA AAGVSVALSL ALAFIPYNGG LLVAALVAMV TGAQVEAWTE RRRVA