Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_2436 |
Symbol | |
ID | 5084825 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | - |
Start bp | 2489382 |
End bp | 2490074 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640483998 |
Product | rpsU-divergently transcribed protein |
Protein accession | YP_001168629 |
Protein GI | 146278470 |
COG category | [S] Function unknown |
COG ID | [COG5590] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR02396] rpsU-divergently transcribed protein |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.48636 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0649596 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACAAAC GGGATGGAAA CGAGAAGGCC CGCGACGCGA TCCTCGATGC CGCGGTGATG CATGTGCCCT TCGACGGCTG GTCCGACGCG ACGCTCCGCG CGTCGGTGCA CGATTCGGGT GTGGCGCCGG GGCTGGCCCG CGCGCTCTTT CCGCGCGGCG GGGTGGATCT CGCGCTGGCC TACCACCGCC GCGGCGACGA ACGGATGCTC GAGAAGGCGG CGACCGTCGA TCTGGGCTCG ATGCGCTACT CGGAGCGGGT GGCGGCGCTG ATCCGCTTCC GCCTCGAGGC GGTCGAGGAC AAGGAGCTGG TGCGCCGGGG CTCGACGCTC TTCAGCTTGC CGCAGCACGC CGCCGACGGG GCGCGCGCCC TGTGGGGGAC GGCCGACCGG ATCTGGATGG CGCTCGGCGA CACGTCGCGC GACGTGAACT GGTACACCAA ACGCGCCACG CTCTCGGCGG TCTATGGCGC GACGGTGCTC TACTGGCTGG GCGACGAGAC GCCGGGCCAT TACGCGACCT GGGAGTTCCT CGACCGGCGC ATCGACGACG TGCTGCGGAT CGAGAAGCTG AAGGCCGAGG CGCAGCGCAA TCCGCTGGTG CGGGCGATGA CCGCCGGGCC GCGGATGGTC ATGCGGCGGG TCCATGCGCC CGCTGCCCAT GCCGACGTGC CGGGCCGGAC GGGCCACCAC TGA
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Protein sequence | MDKRDGNEKA RDAILDAAVM HVPFDGWSDA TLRASVHDSG VAPGLARALF PRGGVDLALA YHRRGDERML EKAATVDLGS MRYSERVAAL IRFRLEAVED KELVRRGSTL FSLPQHAADG ARALWGTADR IWMALGDTSR DVNWYTKRAT LSAVYGATVL YWLGDETPGH YATWEFLDRR IDDVLRIEKL KAEAQRNPLV RAMTAGPRMV MRRVHAPAAH ADVPGRTGHH
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