Gene Rsph17025_2436 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_2436 
Symbol 
ID5084825 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp2489382 
End bp2490074 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content72% 
IMG OID640483998 
ProductrpsU-divergently transcribed protein 
Protein accessionYP_001168629 
Protein GI146278470 
COG category[S] Function unknown 
COG ID[COG5590] Uncharacterized conserved protein 
TIGRFAM ID[TIGR02396] rpsU-divergently transcribed protein 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.48636 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0649596 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACAAAC GGGATGGAAA CGAGAAGGCC CGCGACGCGA TCCTCGATGC CGCGGTGATG 
CATGTGCCCT TCGACGGCTG GTCCGACGCG ACGCTCCGCG CGTCGGTGCA CGATTCGGGT
GTGGCGCCGG GGCTGGCCCG CGCGCTCTTT CCGCGCGGCG GGGTGGATCT CGCGCTGGCC
TACCACCGCC GCGGCGACGA ACGGATGCTC GAGAAGGCGG CGACCGTCGA TCTGGGCTCG
ATGCGCTACT CGGAGCGGGT GGCGGCGCTG ATCCGCTTCC GCCTCGAGGC GGTCGAGGAC
AAGGAGCTGG TGCGCCGGGG CTCGACGCTC TTCAGCTTGC CGCAGCACGC CGCCGACGGG
GCGCGCGCCC TGTGGGGGAC GGCCGACCGG ATCTGGATGG CGCTCGGCGA CACGTCGCGC
GACGTGAACT GGTACACCAA ACGCGCCACG CTCTCGGCGG TCTATGGCGC GACGGTGCTC
TACTGGCTGG GCGACGAGAC GCCGGGCCAT TACGCGACCT GGGAGTTCCT CGACCGGCGC
ATCGACGACG TGCTGCGGAT CGAGAAGCTG AAGGCCGAGG CGCAGCGCAA TCCGCTGGTG
CGGGCGATGA CCGCCGGGCC GCGGATGGTC ATGCGGCGGG TCCATGCGCC CGCTGCCCAT
GCCGACGTGC CGGGCCGGAC GGGCCACCAC TGA
 
Protein sequence
MDKRDGNEKA RDAILDAAVM HVPFDGWSDA TLRASVHDSG VAPGLARALF PRGGVDLALA 
YHRRGDERML EKAATVDLGS MRYSERVAAL IRFRLEAVED KELVRRGSTL FSLPQHAADG
ARALWGTADR IWMALGDTSR DVNWYTKRAT LSAVYGATVL YWLGDETPGH YATWEFLDRR
IDDVLRIEKL KAEAQRNPLV RAMTAGPRMV MRRVHAPAAH ADVPGRTGHH