Gene Rsph17025_2434 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_2434 
Symbol 
ID5084823 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp2487247 
End bp2488041 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content68% 
IMG OID640483996 
ProductKu domain-containing protein 
Protein accessionYP_001168627 
Protein GI146278468 
COG category[S] Function unknown 
COG ID[COG1273] Uncharacterized conserved protein 
TIGRFAM ID[TIGR02772] Ku protein, prokaryotic 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.359133 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.109903 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACCCC GCAGCTACTG GAAAGGCTAT CTGAAACTGT CGCTCGTCAC CTGCCCGGTG 
ACGCTGATGC CGGCCACCTC GGACGCCGAG CGGGTGCGGT TCCGCACGCT CAACGGCAAG
ACGGGTCATC CGGTCGTCAG CCGATACCTC GATGCAGGAA CGGGCGCGGT GGTGGGAGAC
GAGGACCGGG TGAAGGGCTA TCCCCGTGGA GAGGACGAGC ATGTGATCCT CGAGGAGGAG
GAACTGGAGG CGGTCGCGCT CGACAGCGCC CGGACCATCG ACATCGACTG TTTCGTGCCC
TCCGACGAGA TCGCCTGGAT CTGGTATGAC CGGCCGCACT ACCTGATGCC TGCAGACCCG
ATCGGCGAGG AGGCGTTCGC CGTGATCCGC GAGGCGATGC GCGCGACGGA CCGTTCGGGC
ATCGCGCGGC TCGTGCTGGG CGGGCGCGAG CGCGCGGTCC TGCTCATGCC GCGCGGCACG
GGGATCATCC TCTGGACGCT CCGCTTCGGC GACGAGATCC GGCCGGAGGA GGAGTATTTC
GCCGGCATCG GCGGCGGGAA GCCGGACGCC AAGGCGCTGG CCCTGGTCAA GCGGCTGATC
GACGAGCGGA CGCGCAAGTG GGAGCCCGAC ATGGTCGAGG ACCCGGTGCA GGAGAACCTG
CTGGAGCTGA TCCGGTCGAA GAAGCCGAAG AAGGGCGCGC GGAAGAGCAG CCCGAAGACG
GCCCGGGGCG GCGACAATGT CGTGAACATC ATGGACGCGC TCAGGAAGAG CATCGAGGGC
AAGGGCAAGC GTTGA
 
Protein sequence
MAPRSYWKGY LKLSLVTCPV TLMPATSDAE RVRFRTLNGK TGHPVVSRYL DAGTGAVVGD 
EDRVKGYPRG EDEHVILEEE ELEAVALDSA RTIDIDCFVP SDEIAWIWYD RPHYLMPADP
IGEEAFAVIR EAMRATDRSG IARLVLGGRE RAVLLMPRGT GIILWTLRFG DEIRPEEEYF
AGIGGGKPDA KALALVKRLI DERTRKWEPD MVEDPVQENL LELIRSKKPK KGARKSSPKT
ARGGDNVVNI MDALRKSIEG KGKR