| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_2424 |
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| Symbol | |
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| ID | 5084813 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009428 |
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| Strand | - |
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| Start bp | 2474860 |
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| End bp | 2476263 |
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| Gene Length | 1404 bp |
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| Protein Length | 467 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640483986 |
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| Product | glycoside hydrolase family protein |
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| Protein accession | YP_001168617 |
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| Protein GI | 146278458 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2931] RTX toxins and related Ca2+-binding proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.443188 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACATCC GTCACGGCGA CAAGAGCTTT CTGGTATCCA CCTGGGACGC CGGTCAATCC
TACCTCACCA CCTGGTCGGC CGGAAACGTG CGGATCCTCG AGGACGAGCG CGTCGCCCTT
ACGCTGAGCA AGTCCACCGA CGGGCACTCG CGGCCCTGGG TCGGGGGAGA GATCCAGTCG
GACGCCGCCT TCACCACCGG ATCCTGGAGC TGGATGGCCC AGGCGCCGCG GATGGTGGAT
GGCACCGTCT TCGGCCTGTT CCTCTACAAG CAGGACTACC GCACCCAGCC CTGGCGCGAA
TATGACATCG AGTTCGTGGG CGGCGACACG ACGAAGATCC ACCTCGCCGT CCATTTCGAG
GATGCCGGCG GCCGCCACGT CACGCTGCGC AAGCCCCTGA TCATCGACCT CGGCTTCGAC
GCGGCCGCCG CGCCGCATGT GTACGAGATC CAGGTCACCA GCAAGAACGC GTTCTTCCGC
GTTGATGGCG AGACGGTGGC GGTGATCGAC GCTTCCTACG TCGAGGGCGG GGTCTGGGAT
CCGGGCCCGC TCAAGAGCCT CGTCGATCTC TGGGCCACCC CGCCCGAGCT GGCCCCCTGG
GCGGGCCTGA TGAGCACAAG CCACACCGCG CCGCTGACGG CCCATGTCGA GAACATCCGC
CTGCCCTCGG ACAGCACGAT CTTCGGCAAC CGCAGCGCCA ATCTCGTGCA GGGCACGGGC
GCGGCCGATC TTCTCTACGG CTTTGGCGGC AACGACACGC TGGCGGGCGG CGGCGGGGCC
GACAGGATGT ATGGCGGGGC GGGCCACGAC ATCTACCTCG TGGACAATGC GGCCGACCGG
GTGATCGAGC GTGCGGGCGA GGGCACGGAC ACGGTGCGGT CCTCGGTCAG CTACCAGCTC
GAGGCCCATG TCGAGCGCCT GGTCCTGACC GGCAGCGCCG CCATCAACGG CATCGGGAAC
GGGCAGGCCA ACCTGATGAT CGGCAACGGC GCCGCGAACC GCCTTGTCGG GGGCGGCGGC
AATGACCGGC TCGAGGGGCG GAACGGACAT GATCGGCTCG AGGCGGGTGC GGGCCATGAC
ACGCTGATCG GCGGCGCCGG CAACGACCGG CTGCTCGGCG GAACGGGCGC CGACCGCCTC
CACGGTGGCG CGGGCAACGA CACCCTCACC GGCGGGGCTG GCCACGACAC TTTCGTCTTC
GCGCGGGGGC ATGGACGCGA CGTGATCACC GATTTCGTGC CGCGCGGCGG CGAGGACCGT
CTGGAGATCC ACGGCTATGA TCGCGCGGCC GAGGTCCGGC AGGTCGGGGC CGACACGCTC
ATCGTGCTGT CGGACAGCGA CTCCATCCTG CTGCAGAATG TCCGTGTCGC GCAGCTCGGG
CCGGTCGATT TTCTCTTCGT CTAG
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| Protein sequence | MHIRHGDKSF LVSTWDAGQS YLTTWSAGNV RILEDERVAL TLSKSTDGHS RPWVGGEIQS
DAAFTTGSWS WMAQAPRMVD GTVFGLFLYK QDYRTQPWRE YDIEFVGGDT TKIHLAVHFE
DAGGRHVTLR KPLIIDLGFD AAAAPHVYEI QVTSKNAFFR VDGETVAVID ASYVEGGVWD
PGPLKSLVDL WATPPELAPW AGLMSTSHTA PLTAHVENIR LPSDSTIFGN RSANLVQGTG
AADLLYGFGG NDTLAGGGGA DRMYGGAGHD IYLVDNAADR VIERAGEGTD TVRSSVSYQL
EAHVERLVLT GSAAINGIGN GQANLMIGNG AANRLVGGGG NDRLEGRNGH DRLEAGAGHD
TLIGGAGNDR LLGGTGADRL HGGAGNDTLT GGAGHDTFVF ARGHGRDVIT DFVPRGGEDR
LEIHGYDRAA EVRQVGADTL IVLSDSDSIL LQNVRVAQLG PVDFLFV
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