Gene Rsph17025_2157 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_2157 
Symbol 
ID5082935 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp2186421 
End bp2187407 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content70% 
IMG OID640483720 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001168352 
Protein GI146278193 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.010472 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGGCA CCGCCCTGTG CCTGAGCCTG CTCGTCTTCT GGCTGACCCA CCTGCCGCCG 
AACCTCGAGA AGCTCGCCAA GTCGCAAGGC TCGGCCCGCA TGTCCGATGC CGAGGTGGCA
AGCTGGCTGG AACGCTCCGG CTTCGACCGG CCGCTCCCCG TGCTCTATGG CGAGTGGCTG
GGCGTGCTGC CGCGCGCCGA CTGCGGCCAT TGCGGCGTGA TGCAAGGCGA GTGGGGCCAG
TCCACGGTCT TCCGCCAGCC GGTCAGCGCG GTGATCCTGC GCAGTCTTGC GGCGACGGGC
TGGCTCATGC TGTGGGTGAT GGCGGTGATG GTGCCGACGG CGCTGGCCCT CGGGGTGCTG
GCCGGGATGC GCGAGGGCTC GAGGACGGAC CGCACGATCT CGGTGGCGAC GATCCTCACG
GCGGCGACGC CCGAATATGT CTCGGGCGTG GTGCTCGTGG CGCTGTTCGC TTCGGCCACG
GCGGGGCTGT CGCCGCTGCT GCACGAGGCG GGCTGGATCG AGAGGCGCAC GCTGTTCCAG
GGCACCGCCT CGGGGGCGAT GACACGCATC ACCTTCTGGA ACTTTGCCCT GCCGGTGGCG
ACCATCGCGC TCTATGGCAC GGGCTACATC GCGCGCATCA CGCGCGCCTC GATGGCCGAG
GTGATGGCGC AGCCCTACAT CCGCACCGCC CGATTGAAGG GCGCGGGCCT CGCGCGGATC
GTGCTGGTCC ATGCGCTGCG CAACGCGCTC GTGGCGCCGG TCACGGTGAT CCTGCTGCAG
CTTCCGTGGC TGCTGAACGG CGTGGTGATC GTCGAGACAC TGTTTGCCTA CAAGGGCTTT
GGCTGGACGC TGGTGCAGGC GGCGGGCAAC AACGACATCG CCCTGCTGCT GGGCTGCTCG
GTCGTGGCGG TGACGCTGGT GCTGGCGACG CAGGCGCTGT CCGATCTGGC CTATCGCGCC
CTGAACCCGC GGCTGAGGGT GGGCTGA
 
Protein sequence
MLGTALCLSL LVFWLTHLPP NLEKLAKSQG SARMSDAEVA SWLERSGFDR PLPVLYGEWL 
GVLPRADCGH CGVMQGEWGQ STVFRQPVSA VILRSLAATG WLMLWVMAVM VPTALALGVL
AGMREGSRTD RTISVATILT AATPEYVSGV VLVALFASAT AGLSPLLHEA GWIERRTLFQ
GTASGAMTRI TFWNFALPVA TIALYGTGYI ARITRASMAE VMAQPYIRTA RLKGAGLARI
VLVHALRNAL VAPVTVILLQ LPWLLNGVVI VETLFAYKGF GWTLVQAAGN NDIALLLGCS
VVAVTLVLAT QALSDLAYRA LNPRLRVG