| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_2148 |
|---|
| Symbol | |
|---|
| ID | 5082926 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17025 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009428 |
|---|
| Strand | - |
|---|
| Start bp | 2177213 |
|---|
| End bp | 2178547 |
|---|
| Gene Length | 1335 bp |
|---|
| Protein Length | 444 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640483711 |
|---|
| Product | putative membrane-associated zinc metalloprotease |
|---|
| Protein accession | YP_001168343 |
|---|
| Protein GI | 146278184 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0750] Predicted membrane-associated Zn-dependent proteases 1 |
|---|
| TIGRFAM ID | [TIGR00054] RIP metalloprotease RseP |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGGATATTG TCGGTCTCGT TCCCCAGTTC GGCGGGGCAG TCTGGACGAT CATTGCCTTC
ATCGTCGCTC TTTCCATCGT CGTGGCCGTC CACGAATACG GGCATTACGT CGTCGGCCGC
TGGACGGGGA TCCATGCCGA GGTCTTCTCG CTTGGCATGG GGCCCGTCAT CGCCTCGCGC
GTGGACCGGC GCGGAACGCG CTGGCAGCTC GCGGCGCTGC CGTTCGGGGG CTATGTCCGC
TTCCTGGGCG ATGCCGACGC CGCCTCGAGC CGGGCGAGCC TCACGGTTCA CCAGCTGAAC
GAGCAGGAGC GGGGGCGGAC CATGCACGGC GCTCCGCTCT GGGCGAGGTC GGCCACGGTC
GCCGCGGGCC CGCTGTTCAA CTTCGCGCTC TCGATCCTCG TCTTCTGCGG CTTCTTCATG
GTCAAGGGCG TGGCGACCGA ACTGCCCGTG GTCGGACAGA TGAAGGAGCT TCCCTCGGCG
GGGCAAGAGC TTGAGCCGGG CGACCGGATC CTGTCGGTCA ACGGGCAGGA GACGGCGACG
CTGGCCGATT TCGTGCGGGT CGCGAACGAG CTGCCGCCCG CGCCGACCGC CGACTACCGG
ATCGAGCGTG CGGGCGCTGA ACTGGCCCTG ACGACGGCCT ATCCGTTCCC GCCGGTGGTC
GATTCCGTCC AGGCGCCCTC GGGGGCCCAT GACGCGGGCA TCGAGGCGGG GGATGTCATC
CTCTCCGTGA ACGGCGCCGA GATCGCCTCG TTCCGCGAGT TGCGCGAGGC CGTGGGCGCC
ACGAACGGCG CGCCGGTGAC GCTGACCGTC TGGCGGGCGG GCGAGACGTT CGAGGCCACG
CTCAGCCCGC GGCGCATGGA CATTCCGCTT GCGAGCGGAG GTTTCGAGAC CCGCTGGCTG
ATCGGCCTGT CGGGTGGGCT GCTCTTCGAG CCCGAGACCC GCACGCCCGG CCCGATCGAG
GCGATGGGTC TTGGCATCCA GCAGACCTAC ACGGTCATCA CCACCAGCCT GTCAGGTCTC
TGGCACATGG TCACGGGGGC GATCTCGTCG TGCAACCTGC AGGGCCCGAT CGGGATCGCC
GAGATCTCGG GCGCGGCGGC CTCCCAGGGT CCGGGCAACT TCATCTGGTT CATCGCCATG
CTGTCGACGG CGGTGGGGCT CATGAACCTC TTTCCGGTGC CGATCCTCGA CGGCGGGCAT
CTGGTGTTCC ACGCCTACGA GGCCGTCGCC GGCAAGCCGC CCAGCGACCG GGCGCTGCGC
ATCCTGATGA CGGGGGGGCT GGCCATGCTG CTTTCGCTCA TGGTCTTCGC GGTGACGAAC
GACCTGTTCT GCTGA
|
|---|
| Protein sequence | MDIVGLVPQF GGAVWTIIAF IVALSIVVAV HEYGHYVVGR WTGIHAEVFS LGMGPVIASR
VDRRGTRWQL AALPFGGYVR FLGDADAASS RASLTVHQLN EQERGRTMHG APLWARSATV
AAGPLFNFAL SILVFCGFFM VKGVATELPV VGQMKELPSA GQELEPGDRI LSVNGQETAT
LADFVRVANE LPPAPTADYR IERAGAELAL TTAYPFPPVV DSVQAPSGAH DAGIEAGDVI
LSVNGAEIAS FRELREAVGA TNGAPVTLTV WRAGETFEAT LSPRRMDIPL ASGGFETRWL
IGLSGGLLFE PETRTPGPIE AMGLGIQQTY TVITTSLSGL WHMVTGAISS CNLQGPIGIA
EISGAAASQG PGNFIWFIAM LSTAVGLMNL FPVPILDGGH LVFHAYEAVA GKPPSDRALR
ILMTGGLAML LSLMVFAVTN DLFC
|
|---|
| |