Gene Rsph17025_2076 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_2076 
Symbol 
ID5082781 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand+ 
Start bp2118981 
End bp2119610 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content73% 
IMG OID640483639 
ProductHhH-GPD family protein 
Protein accessionYP_001168272 
Protein GI146278113 
COG category[L] Replication, recombination and repair 
COG ID[COG0122] 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.180031 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.218221 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGGCC GCATCCTGAC CTCGCCCGCC TGCATCACCG AGGGCCTCGA CTGGCTCGCC 
CGGCGCGAGC CGCGCTTTGC CGCCGCCCAT GCCCTGACGG GGGATCCCCC TCTCCGCCGC 
AGGCCCGAGG GCTTTGCCGA GCTGGTGGGG GCGATCCTCG GGCAGCAGGT CTCGACCGCG 
GCCGCGGCCG CCATGCGGGC GCGGATGGAG GCCGCGGGCC TCATGTCGCC CGAGGCGGTG 
GCGGCGGCCG ACGAGGCGGC CCTGCGAGGA TGCGGGCTCT CGGCGGCCAA GATCCGCTAT 
GTCCAGGCGC TGGCGCGGGC GACGCTGGAT TATCGCGCGC TGGCGCAGTT GCCGGACGCC 
GAGGTGGTGG TGCGGCTGAC CGCCCTGCCC GGTATCGGCC GCTGGACGGC CGAGCTTTAT 
GCCATGACCT CGCTGGGCCG GGCCGACATC CTCTGCGCCG GCGATCTCGC CTTGCAGGAG 
TCCGCCCGGC TCCTCTTCGA TCTCGAGGCC CGGCCGGGCG AACGCGCATT GAGGGCGATG 
GCCCAAGACT GGAGCCCGTG GCGGGGCGTT GCGGCGCGCC TTCTCTGGGC CTATTACCGT 
CATGCCAAGG GACGGGAAGG AACCGCATGA
 
Protein sequence
MTGRILTSPA CITEGLDWLA RREPRFAAAH ALTGDPPLRR RPEGFAELVG AILGQQVSTA 
AAAAMRARME AAGLMSPEAV AAADEAALRG CGLSAAKIRY VQALARATLD YRALAQLPDA 
EVVVRLTALP GIGRWTAELY AMTSLGRADI LCAGDLALQE SARLLFDLEA RPGERALRAM 
AQDWSPWRGV AARLLWAYYR HAKGREGTA