Gene Rsph17025_2063 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_2063 
Symbol 
ID5082768 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp2105857 
End bp2106597 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content66% 
IMG OID640483625 
ProductABC transporter related 
Protein accessionYP_001168259 
Protein GI146278100 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1126] ABC-type polar amino acid transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0300144 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.143114 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCGAC CCATGCTCGA AATCGTCGCG CTCGAGAAAT CCTTCGGAGA CCTCAAGGTC 
CTGCGCGACA TCAACCTGCG CGTGGCGACC GGCGAGATGG TCTTCGTCAT CGGCCCTTCC
GGATCGGGCA AGTCCACCAT GCTGCGCTGC TGCAACCGGC TCGAGGAACC GACCTCGGGG
GCGATCCTCA TCGACGGCAA GGACATCGTG GGATGCTCCT CCTCGGCGCT GAACCGGATG
CGGCTCGAGG TGGGCATGGT GTTCCAGGGC TTCCACCTCT ATCCACACAT GAATGTCGTG
GCGAACGTGA TGCTCGCCCA GATCAAGGCG CTCAAGCGGC CGAAGGACGA GGCACGCGAG
CGCGCGCTGG CCATGCTCGA CCGCGTGGGG CTGCGCCACC GGGCCGAGAC CATGCCGACG
CAACTCTCGG GCGGCCAGCA GCAGCGCGTG GCGATCGCCC GCGCCCTCGC CCTTGATCCA
AAGGTCATGC TGTTTGACGA GCCCACCTCG GCGCTCGATC CCGAACTGGT GGGCTCGGTG
CTTGCGGTGA TGAAGGACCT CAAGGACAGC GGCATGACCA TGCTGGTCGT GAGCCACGAG
ATGGGCTTTG CCCGCGAGGC GGCCGACCGG GTGGTGTTCA TGGACGGCGG CCTCGTGGTC
GAGGAAGGCC CGCCCGAACA GATCTTCGCC AACCCGAAAG CGGAGCGCAC TCAGGCCTTC
CTCTCGCGCG TGCGGGCCTG A
 
Protein sequence
MSRPMLEIVA LEKSFGDLKV LRDINLRVAT GEMVFVIGPS GSGKSTMLRC CNRLEEPTSG 
AILIDGKDIV GCSSSALNRM RLEVGMVFQG FHLYPHMNVV ANVMLAQIKA LKRPKDEARE
RALAMLDRVG LRHRAETMPT QLSGGQQQRV AIARALALDP KVMLFDEPTS ALDPELVGSV
LAVMKDLKDS GMTMLVVSHE MGFAREAADR VVFMDGGLVV EEGPPEQIFA NPKAERTQAF
LSRVRA