| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_2060 |
|---|
| Symbol | |
|---|
| ID | 5082765 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17025 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009428 |
|---|
| Strand | - |
|---|
| Start bp | 2102393 |
|---|
| End bp | 2103610 |
|---|
| Gene Length | 1218 bp |
|---|
| Protein Length | 405 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640483622 |
|---|
| Product | aspartate aminotransferase |
|---|
| Protein accession | YP_001168256 |
|---|
| Protein GI | 146278097 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.255815 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.115217 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGATCG AAGCGAAATT CCGGAAACTC GGCACCGACA ATGCGCCGGG GCAGGAGGTG
CGCCAGTCGG CATCGGGCCT CGAGGCGCTG ATGCGGGGCG AGCCGCTCGA GGGGCGGCCG
GTCGATTTCT CGCACGGCGA CGTGGATGCG CACGAGCCGA CGCCGGGGGC CTTTGACCTC
TTTTCGGCGG GCGTGGCCGC AGGCGCGGTG CAGGCCTATA CGGAATATCG CGGCGACATG
GGCATCCGCG AGCTGCTGGC CCCGCGGCTG GCCGCCTTCA CCGGCGCGCC GGTCGATGCG
CGCGACGGGC TCATCATCAC ACCGGGCACG CAGGGCGCGC TGTTCCTGGC CGTGGCGGCC
ACGGTCGCGC GCGGCGACAA GGTGGCCATC GTCCAGCCGG ACTATTTCGC CAACCGCAAG
CTCGTCGAGT TCTTCGAGGG CGAGATGGTG CCCGTGCAGC TCGACCATGT CTCGGCCGAC
GAGACGCGGG CGGGCCTCGA TCTGACGGGG CTCGAGGATG CGTTCCGGGC GGGGGCGAAG
GTCTTCCTCT TCTCGAACCC GAACAACCCC GCGGGCGTGG TCTATTCGGC CGAGGAGATC
GGCCAGATCG CGGCGCTGGC TTCGCGCTAC GGGGCCACGG TCATTGCCGA CCAGCTCTAT
TCCCGACTGC GCTACGCGGG CGCGAGCTAT ACGCACCTGC GCGCGCAGGC CATTGATGCC
GAGAATGTCG TCACCATCAT GGGGCCGTCC AAGACCGAGT CGCTCTCGGG CTACCGGCTG
GGCGTGGCCT TCGGCTCGAC CGCCATCATC GCGCGGATGG AAAAGTTGCA GGCGATCGTG
AGCCTGCGCG CGGCGGGTTA CAGCCAGGCC GTGCTCCGCG GCTGGTTCGA CGAGGCGCCA
GGCTGGATGG AGGACCGCAT CGCGCAGCAT CAGGCGATCC GCGACGATCT TCTGCGGGTG
CTGCGCGGCT GCGAGGGCGT CTTCGCGCGC ACCCCGCAGG CGGGCAGCTA CCTGTTCCCG
CGGCTGCCGA AGCTCGCCCT CACGCCGTCC GACTTCGTGA AGGCGCTGCG GCTGCAGGCG
GGCGTGGTCG TCACGCCCGG CACCGAGTTC AGCCCGCACA CCGCCGACAG CGTGCGTCTG
AACTTCAGCC AGGACCACAC AGCGGCGGTG GCGGCGGCCG AGCGGATGGT GGCGCTGGTC
GAGCGGTATC GCGCATGA
|
|---|
| Protein sequence | MSIEAKFRKL GTDNAPGQEV RQSASGLEAL MRGEPLEGRP VDFSHGDVDA HEPTPGAFDL
FSAGVAAGAV QAYTEYRGDM GIRELLAPRL AAFTGAPVDA RDGLIITPGT QGALFLAVAA
TVARGDKVAI VQPDYFANRK LVEFFEGEMV PVQLDHVSAD ETRAGLDLTG LEDAFRAGAK
VFLFSNPNNP AGVVYSAEEI GQIAALASRY GATVIADQLY SRLRYAGASY THLRAQAIDA
ENVVTIMGPS KTESLSGYRL GVAFGSTAII ARMEKLQAIV SLRAAGYSQA VLRGWFDEAP
GWMEDRIAQH QAIRDDLLRV LRGCEGVFAR TPQAGSYLFP RLPKLALTPS DFVKALRLQA
GVVVTPGTEF SPHTADSVRL NFSQDHTAAV AAAERMVALV ERYRA
|
|---|
| |