Gene Rsph17025_2049 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_2049 
Symbol 
ID5082754 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp2092362 
End bp2093006 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content70% 
IMG OID640483611 
ProductGntR family transcriptional regulator 
Protein accessionYP_001168245 
Protein GI146278086 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.384927 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.298494 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCCC CCAGACCCCG CGCCCACGAG GCCTACGAGC GCATCATCTC GATGATCTTC 
CAGGGCGTGC TGAGATCCGG CGACCTTCTG CAGGAGGCGG CGCTGGGCGA GATCTTCGGC
ATGTCGCGCA CCCCCGTGCG CGAGGCGATC AAGCGCCTCG AAAGCGAGGG CCTCGCCGTG
GTCGAGGGCC GCTTCACCTG CGTGCGCAGC GTGACCCCGG CCGACGCCGA GGAGGTGTTC
TTCCTGCGGC TCGAGCTTGA ACCGCTGGCG GCACGGTCGG CGGTGCGGCT GCCGCCGGCC
GAGATCGACG CGATGGAGGC GAAGGTGCGG CATCTGATGG CCTCCGATCC GGTGGTGACC
GACCTGCAGC GCCAGACGGA TCACGAGTTC CACCAGCTGC TCGGGCGCGA GTTCGGCAAT
CAGGCCGTGT CGCAGACCAT CGCGGCCCTG CACCGCCGCA CCTGCATCTT CGACCATCGC
CGCCTGCCCG ACCGCTTTCG CGACGGCTGC GAAGAGCATC TGGCGATCCT CGAGGCGGCG
CGCGGCGGCG ATGCCGACCG GGTCGAGGCC GCCCTGCGTC TCCATATCGA ACATGCCCGC
GAGGCGGTGA TCCAGCATTT GCACCAGGCG ATGCCCGGCG CATGA
 
Protein sequence
MTAPRPRAHE AYERIISMIF QGVLRSGDLL QEAALGEIFG MSRTPVREAI KRLESEGLAV 
VEGRFTCVRS VTPADAEEVF FLRLELEPLA ARSAVRLPPA EIDAMEAKVR HLMASDPVVT
DLQRQTDHEF HQLLGREFGN QAVSQTIAAL HRRTCIFDHR RLPDRFRDGC EEHLAILEAA
RGGDADRVEA ALRLHIEHAR EAVIQHLHQA MPGA