Gene Rsph17025_1842 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_1842 
Symbol 
ID5084903 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand- 
Start bp1881073 
End bp1881714 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content71% 
IMG OID640483401 
Producthypothetical protein 
Protein accessionYP_001168038 
Protein GI146277879 
COG category[S] Function unknown 
COG ID[COG2860] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.310019 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.555417 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCCAGA CCGTCACGAT CCTGCTCGAC TGGTTCGGCC TCGGCATCTT CGCCATGACC 
GGCGCCCTTG TCGCCTCGCG CAAGGAAATG GACATCACGG GCTTTGCGCT GCTCGGGTTC 
GTGACCGGGG TGGGCGGGGG CACGATCCGC GATCTGGTGC TGGGCCGCAC CCCGGTCTTC 
TGGGTGCAGG AGCCGGCCTA TGTGCTCGTC TGCCTCGGCG TTGCGGTGCT GACCTTCTTC 
TTCGCCCATA TACCGCAGTC GCGCTATCGC TTCCTTCTGT GGCTCGACGC GGTGGGACTG 
TCGCTCTTCG CCGTGACGGG GGCCGAGCGC GCGCTCGAAG CCGGGGCGGG GCCGGTGATC 
GCGGTGACGA TGGGGGTGGC GACCGCGACC TTCGGCGGCA TCCTGCGCGA CCTGCTGGGC 
GGGGAAAGCC CGGTGATCCT GCGGCGCGAG ATCTACATCA CCGCGGCACT TCTGGGGGCT 
GCGACCTTCG TGGCGCTCGG CGCTCTTGGC ACCCCGCGCG AGGTGGCGCT GGGGTCGGGG 
TTCGGCGCGG CGTTCCTGCT GCGCGCGGCG GGGCTCGTCT GGGGGCTCTC GCTGCCGCGC 
TACCGGGCGC GGCCGGGGCG GACGCCCGAG GGGCGGGACT GA
 
Protein sequence
MFQTVTILLD WFGLGIFAMT GALVASRKEM DITGFALLGF VTGVGGGTIR DLVLGRTPVF 
WVQEPAYVLV CLGVAVLTFF FAHIPQSRYR FLLWLDAVGL SLFAVTGAER ALEAGAGPVI 
AVTMGVATAT FGGILRDLLG GESPVILRRE IYITAALLGA ATFVALGALG TPREVALGSG 
FGAAFLLRAA GLVWGLSLPR YRARPGRTPE GRD