Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_1812 |
Symbol | |
ID | 5083038 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | + |
Start bp | 1855924 |
End bp | 1856640 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640483372 |
Product | hypothetical protein |
Protein accession | YP_001168009 |
Protein GI | 146277850 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00550856 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCGCAATC CTCCGATCGT GGTCTTCCAC CACTCGCAAA GCCGCGGCGG CAAGGTCGCG CAGGAGATCC TGAAGGGGTT CGCCGGCGGT ACGCTGCTGG TTGACGGCCA TGGCGGCTAC GATCCGCTGG CCGACCCCAA GAAGACCGCG AAGCCCTGGA CCCTGGCCTT CTGCTGGACA CATTGGAGGC GGCGCTTCGT CAAGTTCAGC CAGGACACGC CTTCGCCGAT CTGCGACGAG ATGATCGCGC GGATCGCGCA GCTCTACGCC ATCGAGAAGG AGATCCGCGG CCGTGATCCC GCCGCCCGCG TCACGGTCCG CCAGAAGTTC TCCAAGCCCA TCGTCGAGGC GCTGCGGCCC TGGCTCGAGG GCTGCCTTCA GGATCTCTCC TCGTCCAACG AGCTCAGCAC GCACATCCGG TACGGGCTGA AGAGATGGGA CGGCATGACC CGCTTTCTGG AGGATGGCCG GCTCGAGATG GACACCAATG GGGTCGAGAA CGCGATCCGT CCGATTCCAC TTACAAGAAA GAATGCACTA TTTGCCGGCT CCACGGATGG GGCGAAGACA TGGGCCCGCA TCGCCTCGCT GATCGGCACC TGCCGTCTGA ACGGCGTGAA CCCCGAAGCC TACATCGCAG CGACGCTGCG CAAGATCCTC GACCAACACA TGCAGAGCGA CATCGCCGCG CTGATGCCCT GGAACTTCCG CGAATAG
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Protein sequence | MRNPPIVVFH HSQSRGGKVA QEILKGFAGG TLLVDGHGGY DPLADPKKTA KPWTLAFCWT HWRRRFVKFS QDTPSPICDE MIARIAQLYA IEKEIRGRDP AARVTVRQKF SKPIVEALRP WLEGCLQDLS SSNELSTHIR YGLKRWDGMT RFLEDGRLEM DTNGVENAIR PIPLTRKNAL FAGSTDGAKT WARIASLIGT CRLNGVNPEA YIAATLRKIL DQHMQSDIAA LMPWNFRE
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