Gene Rsph17025_1707 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_1707 
Symbol 
ID5083439 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp1755703 
End bp1756191 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content62% 
IMG OID640483265 
Productautoinducer-binding domain-containing protein 
Protein accessionYP_001167905 
Protein GI146277746 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.997736 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGAACG TTCATCGCGT GCGCGATCTT CTGAATGATG TGGCCGCTCA CTCCGATTGG 
CACTTTGCCA TCGGGGTCAG GATACGATTT GCGAATCCGA CGCTCCTCTA CCAGACCTAC
CCGCGCGAGT GGATCAACCT CTACGCGGAC AAGGCCTTGA TCTTCGTGGA TCCCACCGTG
CGGTGGGGCC TCGAACATCC CGGCATCTGT CGCTGGAGCG ATCTGGCCGA CACGGATGAG
GCTGGAGTCA TGGGGAAAGC GGCCGAATTC GGCCTGCGTT ACGGTCTCGT CGTTTCGGTG
GGCGAGGCGT CCGCCCGCAC GCTCGGCTTC TTCTGCCGCG AGGATCGCGA GCTGGACGAG
GACGAGGCGA AGTTCGCCCT GGCGCAGGTG CAGAATCTGC ATGACCTTAC GGAAGGTATT
GGCCGCACGA CCGAGGGGCA GTTGGCGGAA CTTCGCAACT TGAACGCGAA CCTGCGGCGC
CAGAACTAA
 
Protein sequence
MVNVHRVRDL LNDVAAHSDW HFAIGVRIRF ANPTLLYQTY PREWINLYAD KALIFVDPTV 
RWGLEHPGIC RWSDLADTDE AGVMGKAAEF GLRYGLVVSV GEASARTLGF FCREDRELDE
DEAKFALAQV QNLHDLTEGI GRTTEGQLAE LRNLNANLRR QN