Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_1589 |
Symbol | |
ID | 5082400 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | - |
Start bp | 1631250 |
End bp | 1631984 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640483147 |
Product | peptidase M48, Ste24p |
Protein accession | YP_001167787 |
Protein GI | 146277628 |
COG category | [R] General function prediction only |
COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGCGGT TCGCTTTTGC CGCCGTTCTA CTGGTTCTGG CGGGCTGCGC CGCGCCGATG GGGCCGCAGG CGACGGGTGG TCTGCCCGCC TTTCCGTCGG CGCCCGATCC GGGGCCGTTC CTGACCGAAG GGGATGCGCA GCGCGCCTTT CCGGCGGTGC TGGCCCGGGT CGAGCCTGTG GCGGAAGCCA TCTGCCTCGA GCGCACGCGC GGCGTGCCGT GCGACTTCCA GATCACCGTG GACGCGCGGC CGGGCCTTGA CCCCAACGCC TTCCAGACGC TCGACGCGCA GGGCAGGCCG GTGATCGGCC TCACGCTCTC GCTGATCAGC AGCGCGCGCA ACGTGGACGA GCTGGCCTTT GTCGTCGGCC ATGAAGCCGC GCACCATATC CTCGGCCATA TCCCGCGCCA GCGCGAGACG GCGTTGACGG GGGCGGTGCT GGCCGGTGTG CTGGCGCAGA TGGGCGGGGC CGACGAGCAG ACGATCCGTT CGGTGCAGCA GTTCGGCGCG AACGTGGGCG CGCGCAGCTA TTCCAAGAAT TTCGAGCTTG AGGCCGACGG TCTGGGCACC GAGATCGCGA TCCGTGCGGG ATACGACCCG GTTCATGGCG CGCAGTTCTT CACCCGGCTG CCCGATCCGG GCGACCGCTT CCTGGGCAGC CATCCTCCGA ACGCGCAGCG CATCGCCCTC GTGCGCCGGG CCGCCGAGAG CTTCGGATAT GTCAGCGCCC GCTGA
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Protein sequence | MLRFAFAAVL LVLAGCAAPM GPQATGGLPA FPSAPDPGPF LTEGDAQRAF PAVLARVEPV AEAICLERTR GVPCDFQITV DARPGLDPNA FQTLDAQGRP VIGLTLSLIS SARNVDELAF VVGHEAAHHI LGHIPRQRET ALTGAVLAGV LAQMGGADEQ TIRSVQQFGA NVGARSYSKN FELEADGLGT EIAIRAGYDP VHGAQFFTRL PDPGDRFLGS HPPNAQRIAL VRRAAESFGY VSAR
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