Gene Rsph17025_1589 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_1589 
Symbol 
ID5082400 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp1631250 
End bp1631984 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content70% 
IMG OID640483147 
Productpeptidase M48, Ste24p 
Protein accessionYP_001167787 
Protein GI146277628 
COG category[R] General function prediction only 
COG ID[COG4783] Putative Zn-dependent protease, contains TPR repeats 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCGGT TCGCTTTTGC CGCCGTTCTA CTGGTTCTGG CGGGCTGCGC CGCGCCGATG 
GGGCCGCAGG CGACGGGTGG TCTGCCCGCC TTTCCGTCGG CGCCCGATCC GGGGCCGTTC
CTGACCGAAG GGGATGCGCA GCGCGCCTTT CCGGCGGTGC TGGCCCGGGT CGAGCCTGTG
GCGGAAGCCA TCTGCCTCGA GCGCACGCGC GGCGTGCCGT GCGACTTCCA GATCACCGTG
GACGCGCGGC CGGGCCTTGA CCCCAACGCC TTCCAGACGC TCGACGCGCA GGGCAGGCCG
GTGATCGGCC TCACGCTCTC GCTGATCAGC AGCGCGCGCA ACGTGGACGA GCTGGCCTTT
GTCGTCGGCC ATGAAGCCGC GCACCATATC CTCGGCCATA TCCCGCGCCA GCGCGAGACG
GCGTTGACGG GGGCGGTGCT GGCCGGTGTG CTGGCGCAGA TGGGCGGGGC CGACGAGCAG
ACGATCCGTT CGGTGCAGCA GTTCGGCGCG AACGTGGGCG CGCGCAGCTA TTCCAAGAAT
TTCGAGCTTG AGGCCGACGG TCTGGGCACC GAGATCGCGA TCCGTGCGGG ATACGACCCG
GTTCATGGCG CGCAGTTCTT CACCCGGCTG CCCGATCCGG GCGACCGCTT CCTGGGCAGC
CATCCTCCGA ACGCGCAGCG CATCGCCCTC GTGCGCCGGG CCGCCGAGAG CTTCGGATAT
GTCAGCGCCC GCTGA
 
Protein sequence
MLRFAFAAVL LVLAGCAAPM GPQATGGLPA FPSAPDPGPF LTEGDAQRAF PAVLARVEPV 
AEAICLERTR GVPCDFQITV DARPGLDPNA FQTLDAQGRP VIGLTLSLIS SARNVDELAF
VVGHEAAHHI LGHIPRQRET ALTGAVLAGV LAQMGGADEQ TIRSVQQFGA NVGARSYSKN
FELEADGLGT EIAIRAGYDP VHGAQFFTRL PDPGDRFLGS HPPNAQRIAL VRRAAESFGY
VSAR