Gene Rsph17025_1580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_1580 
Symbol 
ID5082391 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp1621621 
End bp1622904 
Gene Length1284 bp 
Protein Length427 aa 
Translation table11 
GC content68% 
IMG OID640483138 
Producthypothetical protein 
Protein accessionYP_001167778 
Protein GI146277619 
COG category[S] Function unknown 
COG ID[COG4949] Uncharacterized membrane-anchored protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.482239 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCCCA TTGCCGATCA TCCGCTGCGC TACGCGCTTG CCAACGAGTT GCACGCGCGG 
CCCTATCCGG CGCTCGAGGC ACCCTGCCAT GTCGTCTTCA TGGCCTTCAA GGAGCCGCTG
GATGCGGCCA ATCGCGATCG GGGCCGCGAC CGGGCGCACC TGTTCGAGAT CCTCGACCGC
CACGGCACCG CCCACCCCGC GCCGGATTCG ACGCATTTCT CGGCGCCGAT CGGCCGAGCC
GAACTGCGCT GGGAGAGCCA TACGGAGTTC GTCACCTACA CGGCCTTCGT GCCGGGTCTG
CACGAGCGTC CCTTCGATCC GGCCAAGGCC GAGATCTTTC CCGAGGACTG GATCGAGCGG
GCGCCCGGCC GACGGCTTGT CTCGCTCCTG ATCCGCATCG AGGAGATGCC CTCCGAGGAG
GAGGCCGCGA TCGAGCGGTT CGAGGGGTGG TTCGTGCCCG ACAGCCTCGC CTGTTCGCGC
ATCGTGGATG GCGCGGCGCT GGTGGCCGGG GATTTCCGCA TCGATCCGGC GGGCCACATG
CGCTTTTCGG TCTTCGTCCG GCCCGGCACC GGGCCGCGCC GGATCGGGCG GATCGTGACG
CGCCTTTGCG AGATCGAGAC CTACCGCGCC ATGTCGATGC TGGGCCTGAT GCGGGCCCGG
ACCCTGAACG GGCGACTGAA CGCGCTCGAC CCCAAGCTGT CGGCGCTCGT CTCGGGGCTG
GACGAGATCG AGCATTCGCC GGACGAGGCG CTGCACGAGC TTCTGAAGAT CAACGCCGAG
ATGGAGAGCC TTGCGGTGCA GTTCACCTTC CGCTTCGGCG CGACCGCGGC CTACGAGGCG
ATCGTGCACG ACCGGATCCT GGCGCTGCGC GAAGAGCGGA TCAGCGGCCG GCAGACCTTT
GCCGAATTCA TGGCCCGGCG CTACGATCCG GCCATGCGAA CGGTGAAATC GGCCGAGGCG
CGGTTGCGCT CGATGGCCGA GCGGGCGCAA CGGGCGGCGG AGCTGTTGCG CACGCGGGTG
GATGTCGAAC GTTCGGCGCA GAACCAGAAG CTGCTCGAAA GCATGGACCA GCGCGCCGAC
CTGCAACTGC GGCTGCAGCG GACCGTCGAG GGCCTGTCGG TCGTGGCGAT CAGCTATTAT
GCGGTGAGCC TGCTGGCCTA TTCGGTCGCT CCGCTGGCGG AGCCGCTGGG CGTGAGCAAG
GGTGTGGCGA CCGCGGTGCT GACGCCGCTC GTGGTGGTGG CGGTCTGGCT TACGCTGCGG
CGGATCCAGC GCAAGATGCA TTGA
 
Protein sequence
MSPIADHPLR YALANELHAR PYPALEAPCH VVFMAFKEPL DAANRDRGRD RAHLFEILDR 
HGTAHPAPDS THFSAPIGRA ELRWESHTEF VTYTAFVPGL HERPFDPAKA EIFPEDWIER
APGRRLVSLL IRIEEMPSEE EAAIERFEGW FVPDSLACSR IVDGAALVAG DFRIDPAGHM
RFSVFVRPGT GPRRIGRIVT RLCEIETYRA MSMLGLMRAR TLNGRLNALD PKLSALVSGL
DEIEHSPDEA LHELLKINAE MESLAVQFTF RFGATAAYEA IVHDRILALR EERISGRQTF
AEFMARRYDP AMRTVKSAEA RLRSMAERAQ RAAELLRTRV DVERSAQNQK LLESMDQRAD
LQLRLQRTVE GLSVVAISYY AVSLLAYSVA PLAEPLGVSK GVATAVLTPL VVVAVWLTLR
RIQRKMH