Gene Rsph17025_1562 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_1562 
Symbol 
ID5084285 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp1602155 
End bp1602439 
Gene Length285 bp 
Protein Length94 aa 
Translation table11 
GC content65% 
IMG OID640483120 
Productsterol-binding domain-containing protein 
Protein accessionYP_001167760 
Protein GI146277601 
COG category[I] Lipid transport and metabolism 
COG ID[COG3255] Putative sterol carrier protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.764307 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.518591 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAAGG TGATCGACGC CGCAGTGGAA GCGCTCGGCC GCAAGGTGTC CAGCTTCGAC 
GGCAGTGCCA AGTTCATCAT CGCCGATGAG GGGGTGATCA TGATGGACGA GGCCGGCGTG
CGCGCAGGCG ATGGCGAGGC TGACGTCACG ATGACCGCAT CGGCGGACGT GTTCCAGCAG
ATCCTGGAGG GCGATCTCAA CCCGACCATG GCCTTCATGT CGGGCCGTCT CGCCATCGAG
GGGTCGATCC CCATGGCGAT GAAGGTGGGC GCGGCCCTCA GTTGA
 
Protein sequence
MSKVIDAAVE ALGRKVSSFD GSAKFIIADE GVIMMDEAGV RAGDGEADVT MTASADVFQQ 
ILEGDLNPTM AFMSGRLAIE GSIPMAMKVG AALS