Gene Rsph17025_1551 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_1551 
Symbol 
ID5084275 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp1590246 
End bp1591169 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content67% 
IMG OID640483110 
Productamidohydrolase 2 
Protein accessionYP_001167750 
Protein GI146277591 
COG category[R] General function prediction only 
COG ID[COG3618] Predicted metal-dependent hydrolase of the TIM-barrel fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACCG AAGAGCGCCG CCGGGCCTTT CCCAAGGTCG ATGCGCATCA CCACATCTGG 
GATCTCGATG CCCACAGCTA TCCCTGGCTG CAGGAGGGGC CGCCGCGGCA GCGGGTTTAT
GGCAATTCGG CACCTCTGCG GCGCAACTAC CGGATCGAGG ATTACCTGGC CGATGTGGCG
CCCTTCCGGG TCGAGAAGTC GGTCTATCTG CAATGCGGCT GGAACCCCGC CGATCCGGTG
GGCGAGACGC GCTACGCGCA GGCCGTGGCG GATGCGCAGC CCGAGGGCTT TCCCCATGGC
ATCGTCGCCC ATTCCGACCT GGACGCGCCG GGGGTCGAGG ACGAGCTGAA ACGCCACTGC
GGAAGCCCGA ACATGCGCGG CATCCGCATG TTGCTCAGCC ATCACGATAC GCCTGCCTAT
CAATGGGCGC CGCGCGGCGA CTATCTGACG GATCCCGCAT GGCGGCGCGG CTACGAGGCG
CTGGCGCGTC AGGGCCTGTC GTTCGACGCC CAGCTTTACC CTCATCAGAT GCCCGAACTT
GCCCGCATCG CGGCCGAGGT GCCCGAGGTG CCGCTTGTCA TCGACCATTG CGGAATGCCC
ATCGAGCGCG AGAGCGGCGG CCTCGCGCGC TGGCGCGACG GGATGGCGGC GCTGGCGGCG
CTGCCGCATG TGCATCTGAA GATCTCGGGT CTCGGCATGG TCGATCATCA TTGGACGGTC
GAGAGCCTCC GCCCGATCGT GAACGAGGCC ATCGGGATCT TCGGCCCTGA CCGATGCATG
TTCGCCAGCA ACTTCCCGGT CGATGGCCTC AAGAGCAGCC TCGCCACCCT CTTCGACGCC
TTCCTCGAGA TCCTCGCGCC GCGCCCGCTG CCCGAGCAGC AGGCGCTGTT CCACGACAAC
GCCGTCCGCT TCTACCGGCT TTGA
 
Protein sequence
MTTEERRRAF PKVDAHHHIW DLDAHSYPWL QEGPPRQRVY GNSAPLRRNY RIEDYLADVA 
PFRVEKSVYL QCGWNPADPV GETRYAQAVA DAQPEGFPHG IVAHSDLDAP GVEDELKRHC
GSPNMRGIRM LLSHHDTPAY QWAPRGDYLT DPAWRRGYEA LARQGLSFDA QLYPHQMPEL
ARIAAEVPEV PLVIDHCGMP IERESGGLAR WRDGMAALAA LPHVHLKISG LGMVDHHWTV
ESLRPIVNEA IGIFGPDRCM FASNFPVDGL KSSLATLFDA FLEILAPRPL PEQQALFHDN
AVRFYRL