Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_1444 |
Symbol | |
ID | 5082329 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | - |
Start bp | 1476110 |
End bp | 1476769 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640483000 |
Product | ABC transporter related |
Protein accession | YP_001167643 |
Protein GI | 146277484 |
COG category | [R] General function prediction only |
COG ID | [COG4136] ABC-type uncharacterized transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.595469 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGGGGGC TGCGTCTGGA CAGGCTGAGG GTGATGCGGG GCGGCACGCT GCTGGTCGAT CTCGATCTCG ATGTGGCTCC GGGCGAGGTG CTGACCATCA TGGGCCCGTC TGGCTCGGGC AAATCCACGG CCCTCGCCGC CATCATGGGC ACGCTCGGGC CGGGGGTCCG GCAGAGCGGG CGGATCTGGC TCGACGGCCA CGACGTGACC GGGCTGCCCA CGCGCGAGCG GCGAATCGGC CTGCTGTTTC AGGATGACGT GCTCTTTCCG CATCTGTCCG TGGCGGGCAA CCTCGGCTTC GGCCTGCCCG CCGGTGTTCG CGGCGCCGAG CGTCGTGCGC GGATCGAGGC GGCGCTGGAG CAGGCCGATC TTGCCGGCTT TGCCGACCGG GATCCGGCAA CCCTATCGGG CGGCCAGCGG GCGCGGGTGG CGCTGCTGCG GACGCTGCTG GCCGAGCCTG CGGTCCTGCT TCTGGACGAG CCCTTCTCAC GGCTGGACGC GACCCTCCGC GCCCAGATCC GCACCTTCGT GCTGGAGCGC GCACGGCAGA AGGGGCTGCC GGTGATCCTC GTGTCGCACG ACCCCGAGGA TGCCGCGGCG GCCGGTGGCC GCGTCGTCGC GCCGGCGGAA GGCCGCGGAT CGACCCCGGA AGGAACATGA
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Protein sequence | MRGLRLDRLR VMRGGTLLVD LDLDVAPGEV LTIMGPSGSG KSTALAAIMG TLGPGVRQSG RIWLDGHDVT GLPTRERRIG LLFQDDVLFP HLSVAGNLGF GLPAGVRGAE RRARIEAALE QADLAGFADR DPATLSGGQR ARVALLRTLL AEPAVLLLDE PFSRLDATLR AQIRTFVLER ARQKGLPVIL VSHDPEDAAA AGGRVVAPAE GRGSTPEGT
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