Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_1375 |
Symbol | |
ID | 5083049 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | + |
Start bp | 1402137 |
End bp | 1403147 |
Gene Length | 1011 bp |
Protein Length | 336 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640482932 |
Product | phage integrase family protein |
Protein accession | YP_001167577 |
Protein GI | 146277418 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.182465 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAGAAAGA TCGGGCGAAA ACCTTACGTT CGCGAGACCA AGCCGGGGTT TGTATACTTC TACCGGGGCG GAAAATACCT CCACAGGTTC ACCGCCCCGG AAGGTACTGA GGAGTTCGAT CGTCAGTACT GGGAGGTCAT GTCCGGGAAG AAGCAAGAGG CCAAACGCTC GTGGGGCGCG GCCATTGAAG TGCTTCGACA GTCTGACCGA TGGGCCGCGA AGTCTCTGCG GTACCGTCAG GATCTCGAAC CCGTACTAGA GTACCTTGGC GAGAAGATCG GCAAGCGTGA TGTAGCGCGG CTCACCCAAG CCGACATTTA CGAGGCCATG GATCGCAACA AGCATCGGGT CAGGTTCGCG AACTATATCC CGGTGGCGAT CTCGATGATC GCCAAGGAAG TGATCCGGCG GCGCTGGCTC GAGGACAATC CTGCGAAGGG CATCGAGCGG CTTAAGGTCC CGAAGGAGCG GCAGCGCCCT CATGTTCCCT GGCCCGATGC CGCGGTGGTG AAGTTCCGCG CCGAGGCAGG TGACCTGGAG CGCCTGATCT TCGAGATCGG CGTGGGGACC GTCCAGCGGC CCAGTGACTG GATCGGCTTC CGGTGGGGGG ACTATGACGG CGACTCGCTC GTTCTGCGGC AGGGCAAGAC GGGAAAGCCG CTGGTGCTGC CCTGTACCGT GGCGCTCAAG GCTGCCTTGG ACAAAGCCAA GGCCGCGTTG CCCTTCGCGC CGATGCCCAG CCGTCACATC ATCACGAAGC AGGACGGCAG CCGGATGGAC TACCGGCGCT TGGCCGAGAT CATGCTCGCT GAGCGCGCCC GGCTCGGGCT GGAGGCGTAC GACCTTCATG CGCTCCGATA TCGGGGTGTT ATGGAGCTCG CGTGGGCCGG GTGCGACGAC GATGAGATCA TGGCGTACTC GGGGCACTCC ACGAAGGCCA TGGTTCGCAA ATATGCCGGT GAGGCCCGCC AGATCATGCG GGCACGTCAG GCCAGAGGAA AGCGGCAGTG A
|
Protein sequence | MRKIGRKPYV RETKPGFVYF YRGGKYLHRF TAPEGTEEFD RQYWEVMSGK KQEAKRSWGA AIEVLRQSDR WAAKSLRYRQ DLEPVLEYLG EKIGKRDVAR LTQADIYEAM DRNKHRVRFA NYIPVAISMI AKEVIRRRWL EDNPAKGIER LKVPKERQRP HVPWPDAAVV KFRAEAGDLE RLIFEIGVGT VQRPSDWIGF RWGDYDGDSL VLRQGKTGKP LVLPCTVALK AALDKAKAAL PFAPMPSRHI ITKQDGSRMD YRRLAEIMLA ERARLGLEAY DLHALRYRGV MELAWAGCDD DEIMAYSGHS TKAMVRKYAG EARQIMRARQ ARGKRQ
|
| |