| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_1311 |
|---|
| Symbol | |
|---|
| ID | 5083270 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17025 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009428 |
|---|
| Strand | + |
|---|
| Start bp | 1339538 |
|---|
| End bp | 1341745 |
|---|
| Gene Length | 2208 bp |
|---|
| Protein Length | 735 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640482870 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001167517 |
|---|
| Protein GI | 146277358 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCTGC GCCTCTCCCT CCTGATCGAT GCGAACGCGA AGGGCGCGAA GACGGAGCTC
GACGCGACGG CCGGCGCCGC GAAGAAGCTG ACGACGCAGG TGGACCAGCT CGGCAAGGAG
GCGGCCCGGA CGCGGACCCA GCTGGGCGGC GTCCAGAACC AGACCGGCCC CCTCGGCCGG
GGGATGGAGC TCTCGGCCGG CGCCGTGGGC AACCTCACGG CCCAGTTCAA CGACATCGGC
ATGATGCTGA TGGCCGGACA GAACCCGCTG ATGCTGGCGG TGCAGCAGGG GACGCAGATC
ACCCAGGTGA TCGGCCCGAT GGGCGCGGCC GGCGCGGTGC GGGCCCTCGG CGCGGCCTTC
ATGAGCCTCC TGAGCCCGGT CAACCTGGTC ACCCTCGGCG TGATCGCCGG CGGCGCGGCG
CTGATCCAGT GGCTCACGTC CGCAGGGGGC GGGGCCAGGT CGTTCGAGGA CGCCGTCGGG
GCGCTGGAAA AGCAGGTGGA TGCCTATACG GCGGCCAGCG GACGCGCCCG CAGTTCGACC
GAGGAGCTGA CGAAGAAGTT CGGGGCCCAG CAGGGCGCGA TCCGGGCGCT GCTCGGGGAT
CTGGCGGAAC TGGAGCGCCG CGAGACGCAG CGGGCGCTGC GGGAGAGTGC GCGCACCGCC
TCGGGCGACG TGATGAGGAA CCGGTGGCTG ACGCTGGACT TCTCGGATCA GGCGACGACT
GCGAAGTTCT TCGCCCTGGA CACACAGGTT CACGGCGTCT GGAAACAGGT CAACGACCTG
ATCGGGGCGT TCGAGACCCT CGAGCAGGCG GCGACGCTCG ACCAGCAGAT CAAGGCCGCG
GAAAACCTGA AGACCGCCTT CCTCGCGGCC GCTGCCGCAT CGGGTGACAT TTCGAGAGAG
GAAGATGCCG TCCTGCGCCA GATCATCCAG ATGATCGAGC AGATGCGCAG CTTCGAGGCG
GAGCAGGCCC GTGCCTTCTT CACGAGCAGC GGCCTGGCCG ACATCATGGC CACCATTCGG
GCGGAGCTGT CCTTGGCGGC GGGATCGAAC CTTGCCAGGG TCTTCATCGA CGCGAATGGT
CCTGCCGAAA TGCTCCTGTT CAAGGCCAAC GCGATCCGGG CTGCCCTCGC TGGGGCCGCC
AGGGAACTGC AGGACATCGA AGGCGACGCG GTCATGTCGC CGCCCGAGCC GCCCCGGATC
GACGGCAGGC CCGGCGAGCA AGGGTTCGGC AATCCCTATG CTGGAGAGGG TGGCGCTGGT
CCAGGTTCAT CGCCTCGCCC GCGAGGCGCG ACGATCGACT CCTATGATCG CTTTCTGGCC
GCTCAGGAAG CGGCTGCCCG GGCGGCTGCG CGCGCCGGCC GCGGGGGCGG GGTCTCGGCC
ATCGAGAAGC AGCGCAAGGC GCTCGACGAG CTGCTGCGGC AGGAGCAGCT TGCCCTCGAC
CTCGCGCGCG AGAGCGATCC GCTCCAGAAG GAGATGATCC GCAACCGCGA TGTGCTGGCC
GCCGCCACGG ATGCCGAGCG CGCCAAGGTC GAGCAGATGA TCGGCGCCAG GCTGCGTGAG
ATCGAGGTCG CGAAAGCCCT CAGCGATGAG TACGAGTTCC TCGGCCAATC GTCGCTTGAC
GCCCTGAACG GCATGATCGT CCAGGGCAAG TCCGCCTCCG ACGTCATCGC CAGTCTGGCA
AGCTCCCTCG CCTCGGCCGC GCTCCAGTCG ATGTGGCTCG GCAGCGGTCC GCTGTCTGCC
ATCTTCGGAA CGGCAGGAAG CGGCGGTCTC TTCGGGAGTC TGTATTCGGC GGTGCGCCGC
TCGGGAGGTG GTCCGGTCTC GGGCCCCGGC ACCGGCACCT CGGACAGCAT CGCCGCCTGG
CTCTCGAACG GCGAGTTCGT GATCAACGCG GCCTCGACCG CCGCCTGGCG GCCGGTTCTC
GAGGCAATCA ACGCCGACCG GTCCGGGTCG CTCCTGCGCC AGGCCCCCCG CTTCGCGGCC
GGCGGCATGG TCGGCGGTGC CCGTGCCGCG GCGCTTGCCC GGGGCGCGGC GGCCGAGCAG
CGCCTCGTGG TCGATCTGCG GCTGTCGCAG GATCTCGACG CCCGGATCGA GAGCCGCTCT
TCCGAGGTCG CCCTCAACAC GGTGCGGGCC GGCCTCGACC AGTTCAACCG CAACGTCCTG
CCGGGCCGCG TCCAGCAGAT CAACGCCGAC CCGAGGAAGA AGGCCTGA
|
|---|
| Protein sequence | MSLRLSLLID ANAKGAKTEL DATAGAAKKL TTQVDQLGKE AARTRTQLGG VQNQTGPLGR
GMELSAGAVG NLTAQFNDIG MMLMAGQNPL MLAVQQGTQI TQVIGPMGAA GAVRALGAAF
MSLLSPVNLV TLGVIAGGAA LIQWLTSAGG GARSFEDAVG ALEKQVDAYT AASGRARSST
EELTKKFGAQ QGAIRALLGD LAELERRETQ RALRESARTA SGDVMRNRWL TLDFSDQATT
AKFFALDTQV HGVWKQVNDL IGAFETLEQA ATLDQQIKAA ENLKTAFLAA AAASGDISRE
EDAVLRQIIQ MIEQMRSFEA EQARAFFTSS GLADIMATIR AELSLAAGSN LARVFIDANG
PAEMLLFKAN AIRAALAGAA RELQDIEGDA VMSPPEPPRI DGRPGEQGFG NPYAGEGGAG
PGSSPRPRGA TIDSYDRFLA AQEAAARAAA RAGRGGGVSA IEKQRKALDE LLRQEQLALD
LARESDPLQK EMIRNRDVLA AATDAERAKV EQMIGARLRE IEVAKALSDE YEFLGQSSLD
ALNGMIVQGK SASDVIASLA SSLASAALQS MWLGSGPLSA IFGTAGSGGL FGSLYSAVRR
SGGGPVSGPG TGTSDSIAAW LSNGEFVINA ASTAAWRPVL EAINADRSGS LLRQAPRFAA
GGMVGGARAA ALARGAAAEQ RLVVDLRLSQ DLDARIESRS SEVALNTVRA GLDQFNRNVL
PGRVQQINAD PRKKA
|
|---|
| |