Gene Rsph17025_1263 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_1263 
Symbol 
ID5084776 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp1302674 
End bp1303477 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content69% 
IMG OID640482821 
ProductKu domain-containing protein 
Protein accessionYP_001167469 
Protein GI146277310 
COG category[S] Function unknown 
COG ID[COG1273] Uncharacterized conserved protein 
TIGRFAM ID[TIGR02772] Ku protein, prokaryotic 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.647128 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCAGAG CGATCTGGAA GGGCTGGCTG GCGGTGGGGC AGGTGAGCTG CGCCGTGGCG 
CTTCATGCCG CGGCCTCGAC GTCCGACCGG GTGAGCTTTC ACACGGTGAA CCGGCAGACC
GGCAACCGCG TCCGACGGGA GTTCGTCGAT GCGGCCAGCG GCAAGCCCGT CCCGCGCGAG
GATCAGGTCA AGGGCTACGA GGTGGCGCCG AACGAGTTCG TGCAGCTCGA TCCCGAAGAG
ATCGCGGCCG CCGTCCCCGA AAGCGACAAG TGCCTGCGCA TCGACTGTTT CGTGCCCTGC
CGCGAGGTGG ACGGCGCCTA TTTCGACAAG CCCTACTATC TCACCCCGGC CGGAGAGGCC
GCCGAAGAGG CCTTCGGGCT CATCCGTGAC GGGCTGAAGG CGAAGAAGGC GGCGGCGCTG
GCCCGAACCG TGCTGTTCCG GCGCTTGCGG ACGGTGCTGG TGCGCCCGCA CGGCGCGGGC
CTGATCGCCA ACACGCTGAA CTTCGACTAT GAGGTGCGGT CGTCCGAGGA GGCCTTCGCC
GACATGCCCC GCCTGTCGGT CAAGGGCGAG ATGCTGGAAC TGGCGAAACA TATCATCGCG
ACCAAGGCGG GCCGGTTCGA TCCCGCCGCC TACGATGACC GCTATGATGC GGCGCTGGCC
GATCTGGTGA AGGCCAAGCT CGAGGGGCGG AAGCCCAGGC GCAAGGCGGC GCCGAAGAAA
GCGGGGCAGC CGGAGGATCT CATGGCGGCC TTGCGCGACA GCGTCGCCGC CTCCGAACGG
CCGAGGCGCC GCAAGACTGG CTGA
 
Protein sequence
MPRAIWKGWL AVGQVSCAVA LHAAASTSDR VSFHTVNRQT GNRVRREFVD AASGKPVPRE 
DQVKGYEVAP NEFVQLDPEE IAAAVPESDK CLRIDCFVPC REVDGAYFDK PYYLTPAGEA
AEEAFGLIRD GLKAKKAAAL ARTVLFRRLR TVLVRPHGAG LIANTLNFDY EVRSSEEAFA
DMPRLSVKGE MLELAKHIIA TKAGRFDPAA YDDRYDAALA DLVKAKLEGR KPRRKAAPKK
AGQPEDLMAA LRDSVAASER PRRRKTG