Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_1223 |
Symbol | |
ID | 5084507 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | - |
Start bp | 1266390 |
End bp | 1267079 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640482781 |
Product | hypothetical protein |
Protein accession | YP_001167429 |
Protein GI | 146277270 |
COG category | [S] Function unknown |
COG ID | [COG3159] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.540946 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.173765 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATCGAAC AGGACCTGCG CGACAAGCTG ATCGCGACCC CCGAGATGAT CCTCGAGGAC CGCGACCTGA TGAAGGCCCT CATCGCGGCG AACGAGCGCG CGATGGGGGC CAATGTGATC GACCTGCGCG GCATCGCGAT GGAGCGGCTC GAAGGGCGGC TGGACCGGCT CGAGGACACC CATCGCTCGG TCATCGCCGC GGCCTACGAG AACCTCGCCG GGACCAACCT GATCCACCGG GCGATCCTGC AGATGCTGGA TCCGCTGGGT TTCGAGGAGT TCCTGCTCAA CCTCTCGACC GAGGTGGCGC AGACCCTGCG GGTGGATTGC ATCCGGCTCG TGCTCGAGAC CGCGCAGCGC GACGCCGATC CCGCGCTCGG GCGGCTCGGC GAGGTGCTCC ATGTGGCCGA GCCGGGCTTC GTCGCCGACT ATGTGGCCGG GGGGCGCAAC GTGCCGCTGC GCCCCGTCAC GCTGCGGCGC ACCCTGCCGG ACACGGTGCT CTACGGTGAG GCTTCGCCCG GCATGGCCTC CGAGGCGCTC ATGCGGCTCG ACTTCGGGCG CGGGCGGCTG CCGGGGATGC TGGCCATGGG CTCGGCCGAT GCCGACCATT TCAAGCCGAC GCAGGGCACC GACCTCCTGG CCTTCTTCGC CGGCGTGTTC GAGCGGACGA TGCGCCGCTG GCTCTCGTGA
|
Protein sequence | MIEQDLRDKL IATPEMILED RDLMKALIAA NERAMGANVI DLRGIAMERL EGRLDRLEDT HRSVIAAAYE NLAGTNLIHR AILQMLDPLG FEEFLLNLST EVAQTLRVDC IRLVLETAQR DADPALGRLG EVLHVAEPGF VADYVAGGRN VPLRPVTLRR TLPDTVLYGE ASPGMASEAL MRLDFGRGRL PGMLAMGSAD ADHFKPTQGT DLLAFFAGVF ERTMRRWLS
|
| |