Gene Rsph17025_1223 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_1223 
Symbol 
ID5084507 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp1266390 
End bp1267079 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content70% 
IMG OID640482781 
Producthypothetical protein 
Protein accessionYP_001167429 
Protein GI146277270 
COG category[S] Function unknown 
COG ID[COG3159] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.540946 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.173765 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGAAC AGGACCTGCG CGACAAGCTG ATCGCGACCC CCGAGATGAT CCTCGAGGAC 
CGCGACCTGA TGAAGGCCCT CATCGCGGCG AACGAGCGCG CGATGGGGGC CAATGTGATC
GACCTGCGCG GCATCGCGAT GGAGCGGCTC GAAGGGCGGC TGGACCGGCT CGAGGACACC
CATCGCTCGG TCATCGCCGC GGCCTACGAG AACCTCGCCG GGACCAACCT GATCCACCGG
GCGATCCTGC AGATGCTGGA TCCGCTGGGT TTCGAGGAGT TCCTGCTCAA CCTCTCGACC
GAGGTGGCGC AGACCCTGCG GGTGGATTGC ATCCGGCTCG TGCTCGAGAC CGCGCAGCGC
GACGCCGATC CCGCGCTCGG GCGGCTCGGC GAGGTGCTCC ATGTGGCCGA GCCGGGCTTC
GTCGCCGACT ATGTGGCCGG GGGGCGCAAC GTGCCGCTGC GCCCCGTCAC GCTGCGGCGC
ACCCTGCCGG ACACGGTGCT CTACGGTGAG GCTTCGCCCG GCATGGCCTC CGAGGCGCTC
ATGCGGCTCG ACTTCGGGCG CGGGCGGCTG CCGGGGATGC TGGCCATGGG CTCGGCCGAT
GCCGACCATT TCAAGCCGAC GCAGGGCACC GACCTCCTGG CCTTCTTCGC CGGCGTGTTC
GAGCGGACGA TGCGCCGCTG GCTCTCGTGA
 
Protein sequence
MIEQDLRDKL IATPEMILED RDLMKALIAA NERAMGANVI DLRGIAMERL EGRLDRLEDT 
HRSVIAAAYE NLAGTNLIHR AILQMLDPLG FEEFLLNLST EVAQTLRVDC IRLVLETAQR
DADPALGRLG EVLHVAEPGF VADYVAGGRN VPLRPVTLRR TLPDTVLYGE ASPGMASEAL
MRLDFGRGRL PGMLAMGSAD ADHFKPTQGT DLLAFFAGVF ERTMRRWLS