Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_1194 |
Symbol | |
ID | 5084478 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | - |
Start bp | 1236531 |
End bp | 1236992 |
Gene Length | 462 bp |
Protein Length | 153 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640482752 |
Product | thioesterase superfamily protein |
Protein accession | YP_001167400 |
Protein GI | 146277241 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism |
TIGRFAM ID | [TIGR00369] uncharacterized domain 1 |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.149341 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.623252 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGAGC CGTCCTCATC CGCCCTTGAT CGCGTCCGCG CCAGCTTTGC CCGGCAGGCT GCCATGGATC TCATCCGCGC CACCCTTCCG CTGGTGGAGC CGGGGCGGAC CGAGATCCAC CTGCCGCACT GGGACGGGAT CGAGCAGCAG CACGGCTTCA TCCACGGGGG CGTGGTCGGC ATGATCGCGG ACTCGGCCGC GGGCTATGCG GCCATGACGC TGGTGCCGGC CGATGCCTCG GTCCTGACGG TGGAATACAA GATGAACCTG ATGGCGCCGG CCGATGGCCA CGGGCTGATC GCGCGGGGCG AGGTGGTGCG CGCGGGCCGG ACGCTGATCG TGACGCGGGC CGAGGTGGTG GCGCTGCGCG ATGGGGCCGA ACAGGCCTGC GCCCTCATGC AGCAGACGAT CATGGTGATG CGCCATCGGG GCGAGAAGCG GGAGTCCGGC GTCGGCGGCT GA
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Protein sequence | MAEPSSSALD RVRASFARQA AMDLIRATLP LVEPGRTEIH LPHWDGIEQQ HGFIHGGVVG MIADSAAGYA AMTLVPADAS VLTVEYKMNL MAPADGHGLI ARGEVVRAGR TLIVTRAEVV ALRDGAEQAC ALMQQTIMVM RHRGEKRESG VGG
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