| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_1169 |
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| Symbol | |
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| ID | 5084342 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009428 |
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| Strand | + |
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| Start bp | 1211751 |
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| End bp | 1213721 |
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| Gene Length | 1971 bp |
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| Protein Length | 656 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640482727 |
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| Product | cytochrome c-type biogenesis protein CcmF |
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| Protein accession | YP_001167375 |
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| Protein GI | 146277216 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1138] Cytochrome c biogenesis factor |
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| TIGRFAM ID | [TIGR00353] c-type cytochrome biogenesis protein CcmF |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.291829 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGTTG AACTCGGCCA TTTCGCGCTG GTGCTGTCAC TGGGCGTAGC CCTCGTGCAG
TCCTTCGTGC CGCTCGTGGG GGCGCACAAA CGCTGGTCCG GCTGGATGGC CGTGGCCGAG
CCCGCCGCCA TGACCCAGCT CCTGCTGATC GGCTTTTCCT TCGCCGCGCT GACCTGGGCC
TTCGTCACCT CCGACTTCTC GGTGAGGCTG GTCGTGCTCA ACTCGCACAC GCTGAAGCCG
ATGCTCTACA AGATCAGCGG CGTCTGGGGG AACCACGAGG GCTCGCTGCT CCTGTGGGTG
CTGATCCTCG CGCTGTTCGG CGCCTGTGCC GCGGCCTTCG GACAGAACCT GCCGCCCACG
CTGAAGGCGC GGGTGCTGGC GGTGCAGGGG ATGATCGGCG CGGCCTTCCT CGCCTTCCTG
CTCTTCACCT CGAACCCGTT CCTCCGCGTC GGCGAGCCGC CCTTCGACGG ACAGGACCTG
AACCCGCTCC TGCAGGATCC GGGTCTCGCC TTCCATCCGC CCTTCCTCTA CCTGGGCTAT
GTCGGGCTTT CGATGGCCTT CTCCTTCGCG GTCGCCGCGC TGATCGAGGG GCGGGTGGAC
GCCGCCTGGG GGCGCTGGGT CCGGCCCTGG ACGCTGGCGG CGTGGGTGTT CCTGACCATC
GGCATCGCGC TCGGCTCCTG GTGGGCCTAT TACGAACTGG GCTGGGGCGG CTTCTGGTTC
TGGGACCCGG TCGAGAACGC CTCGTTCATG CCCTGGCTGA TCGCGGCGGC GCTCCTGCAT
TCGGCGATCG TGGTGGAAAA GCGCGAGGCG CTGAAGAGCT GGACGATCCT TCTGGCGATC
CTGGCCTTCG GCTTCTCGCT GATCGGCACC TTCATCGTGC GCTCGGGCGT GATCACCTCG
GTCCATGCCT TTGCCAACGA TCCCGAGCGC GGGGTCTTCA TCCTGCTGAT CCTGGCCGTC
TTCATGGGCG GCGCGCTGAC GCTCTTTGCC GCCCGCGCAA GCGCCATGGA GGCCAAGGGC
GTGTTCGGCA TCGTCAGCCG CGAATCCGGT CTGGTGCTGA ACAATGTCCT GCTGACGGTG
GCCTGTTTCG TGGTGTTCAT CGGCACGATC TGGCCGCTGG TGGCCGAGCT TCTGTGGGAC
CGCAAGCTGT CGGTCGGGGC GCCCTTCTTC AACGCGGCCT TCACGCCCTT CATGGTGGTG
ATCGCGCTCG TGCTGCCGCT CGCCGCCGTG CTGCCCTGGA AGCGCGCGCA GCCTGGCCGG
GCGATGCGGC CGCTCTGGGG GGCGCTTGCG CTTTCGGTGG CGCTCGGCGG GCTGGTCTTC
GCGATGCAGA CCGGCCGTTC CGCCCTCGGG CCGGTGGGGC TGGCGCTGGG CTCCTGGCTC
GTGCTGGGGG CGATCGTGGA TCTCTGGGGC CGGACCGGCC GCGGCGAACT GGCCGGCCGT
CTGCGGCGCC TGTCGCGGCT GCCGCGCGCC GACTGGGGCA AGGCCACCGC CCACGCCGGT
CTCGGCGTCA CGATCTTCGC GGTCGCGGGC ATCACCGCCT GGCAGGTCGA GGATATCCGC
GTGATGCGCC CGGGCGAGAG CTTCACCCTC AACGCCTACA GCATCACACT CGAGGGCGTG
CGCGAGGTCG AGGGCCCGAA CTACGCCTCG GTCATGGCCG ACTTCCGCGT GACCCGCGAC
GGGCGCGAGG TCGCGACGCT CCACCCCGAG AAGCGCAGCT ATCCGGTGGC CGCCATGCCC
ACGACCGAGG CCGCGATCGA CTATGGCTTC ACCCGCGACC TCTATCTCGT GATCGGCGAC
GCGCAGGAGG GCGGTGGCTA CGCGGTGCGC AGCTACATCA AGCCCTTCGC CAACTGGATC
TGGGGTGGCT CGATGCTCAT GGCACTCGGC GGACTTCTGA GCCTGACGGA CCGCCGCTAC
CGCATCGCCG CCGGCGCGCG CCGGCCGCCT GTCGCGGTGG CCGCGGAATG A
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| Protein sequence | MIVELGHFAL VLSLGVALVQ SFVPLVGAHK RWSGWMAVAE PAAMTQLLLI GFSFAALTWA
FVTSDFSVRL VVLNSHTLKP MLYKISGVWG NHEGSLLLWV LILALFGACA AAFGQNLPPT
LKARVLAVQG MIGAAFLAFL LFTSNPFLRV GEPPFDGQDL NPLLQDPGLA FHPPFLYLGY
VGLSMAFSFA VAALIEGRVD AAWGRWVRPW TLAAWVFLTI GIALGSWWAY YELGWGGFWF
WDPVENASFM PWLIAAALLH SAIVVEKREA LKSWTILLAI LAFGFSLIGT FIVRSGVITS
VHAFANDPER GVFILLILAV FMGGALTLFA ARASAMEAKG VFGIVSRESG LVLNNVLLTV
ACFVVFIGTI WPLVAELLWD RKLSVGAPFF NAAFTPFMVV IALVLPLAAV LPWKRAQPGR
AMRPLWGALA LSVALGGLVF AMQTGRSALG PVGLALGSWL VLGAIVDLWG RTGRGELAGR
LRRLSRLPRA DWGKATAHAG LGVTIFAVAG ITAWQVEDIR VMRPGESFTL NAYSITLEGV
REVEGPNYAS VMADFRVTRD GREVATLHPE KRSYPVAAMP TTEAAIDYGF TRDLYLVIGD
AQEGGGYAVR SYIKPFANWI WGGSMLMALG GLLSLTDRRY RIAAGARRPP VAVAAE
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