Gene Rsph17025_1086 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_1086 
Symbol 
ID5084689 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand+ 
Start bp1109811 
End bp1110443 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content68% 
IMG OID640482644 
Producthypothetical protein 
Protein accessionYP_001167292 
Protein GI146277133 
COG category[S] Function unknown 
COG ID[COG5448] Uncharacterized conserved protein 
TIGRFAM ID[TIGR02217] conserved hypothetical protein TIGR02217 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0524339 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTTTC ACGAGGTCCG CTTTCCGACG AACCTCAGCT TCGGCTCGGT CGGCGGCCCC 
GAGCGGCGGA CCGAGATCGT CACGCTGGTC AATGGGTTCG AGGAGCGCAA CAGCCTCTGG 
GCGCATTCAC GCCGCCGATA TGATGCGGGG GTGGCGTTGC GCTCGCTGCG CGACGTGGAG 
GCGGTGCTGG CCTTTTTCGA GGCGCGCCGC GGGCAGCTTT TCGGGTTTCG CTGGAAGGAC 
TGGGCCGACT TCCGCTCCTG CGCGCCGGAT GAGGTGCCGC AAGCCCATGA TCAGATCATC 
GGCACTGGCG ACGGCACGGC GCGCACCTTT GCACTGCAGA AGACCTACAG TTCGGGTGCG 
GAAAGCTATG TCCGGCCTGT GACCAAGCCC GTGGCCGGGA CAGTGACCGT GGCCGTGTCC 
GGCACGGCGC TGGCACCGGG TGCGGGCTTC TCGCTCGATG CGACGACGGG GCTGGTGACA 
CTCGCCGTCG CCCCCGCCGC GGGGGCGGAG GTCACGGCGG GCTTCGAGTT CGACGTCCCT 
GTCCGGTTCG ACACGGACCG GATCCAGATC TCGATGGCTT CGTTCCAGGC GGGCGAGGTG 
CCGAGCGTTC CCGTGATGGA GGTGCGGGTC TGA
 
Protein sequence
MSFHEVRFPT NLSFGSVGGP ERRTEIVTLV NGFEERNSLW AHSRRRYDAG VALRSLRDVE 
AVLAFFEARR GQLFGFRWKD WADFRSCAPD EVPQAHDQII GTGDGTARTF ALQKTYSSGA 
ESYVRPVTKP VAGTVTVAVS GTALAPGAGF SLDATTGLVT LAVAPAAGAE VTAGFEFDVP 
VRFDTDRIQI SMASFQAGEV PSVPVMEVRV