Gene Rsph17025_1020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_1020 
Symbol 
ID5084637 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp1045999 
End bp1046871 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content71% 
IMG OID640482577 
Productalpha/beta hydrolase fold 
Protein accessionYP_001167226 
Protein GI146277067 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID[TIGR03056] putative magnesium chelatase accessory protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0139875 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCTCG ACCGGATGCC CCTCGACTGG CCCGGCCGAG AGTCCATGCG GCGCATCGAC 
TGCCCGCCGC ACCAGTGGTG CGTGCTGGAC AAGGGCACCG GCCCGACCGT GCTGCTCTTG
CACGGCGCGG GCGGGGCAAG CCACTCCTGG CGCAACCTCG TGCCGCTCAT GGTGCCGCAC
TACCGGATCG TCGCGCCGGA CCTGCCGGGC CAGGGCTTCA CCAGGGCCGG ACAGCGGCGC
TTCTCGCTCG ACGCGATGGC CGAGGACATG GCGCGGCTCT CGGCGGCCGA GGAATGGTGG
CCCGCCGTCA TCATCGGCCA TTCCGCCGGG GCCGCGCTCG CGCTGCGGCT GGCCGAGATC
CTGCCCACGC CGCCCCGTGC CGTGGTGGGA ATCAACGCGG CCCTTGGCAA TTTCGAGGGA
ACGGCGGGCT GGCTCTTTCC GCTCATCGCC AAGATCCTCG CGCTCAATCC CTTCATCCCG
CCGATCGCCG CCCGGCTGTT CGGGGTCGAG GACCGGGTGC GCAAGCTGAT CGGAGCCACC
GGCTCGGAGC TCGATGAGGC GGGCCTGCGC CAGTATGTGA CGCTGATCGG CGACCATGTG
CATGTGGAGG GGACGCTGTC GATGATGGCG CAGTGGCGGC TGGACAAGCT GCAACGCCAC
CTGCCGGCGA TCGACGTGCC GACGCTGCTG ATCGCGGCGG CCGGGGATGG CACGGTGCCT
GCCCGCATCT CGCGCGAGGC GGCCGGCCGG ATGCCCTTCG GCCGCTATGT CGAGATCCCG
CGCCTCGGCC ATCTCGCGCA TGAAGAGGAT GCGGCGGCCG TGGCCGCGAT CCTTCTGCCC
TGGATCGCCG AGCGGCTGCA TCCGCCGGGC TGA
 
Protein sequence
MDLDRMPLDW PGRESMRRID CPPHQWCVLD KGTGPTVLLL HGAGGASHSW RNLVPLMVPH 
YRIVAPDLPG QGFTRAGQRR FSLDAMAEDM ARLSAAEEWW PAVIIGHSAG AALALRLAEI
LPTPPRAVVG INAALGNFEG TAGWLFPLIA KILALNPFIP PIAARLFGVE DRVRKLIGAT
GSELDEAGLR QYVTLIGDHV HVEGTLSMMA QWRLDKLQRH LPAIDVPTLL IAAAGDGTVP
ARISREAAGR MPFGRYVEIP RLGHLAHEED AAAVAAILLP WIAERLHPPG