Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_0957 |
Symbol | |
ID | 5085024 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | + |
Start bp | 979326 |
End bp | 979898 |
Gene Length | 573 bp |
Protein Length | 190 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640482514 |
Product | methyltransferase type 12 |
Protein accession | YP_001167163 |
Protein GI | 146277004 |
COG category | [R] General function prediction only |
COG ID | [COG4106] Trans-aconitate methyltransferase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0352326 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGTGTGA CCCTGGCCCA GACACTGGAC CGCTGCCTCG ACATTGCGGG CAATCCCACC GTTGCCCTGA GCTTCCCGCA ACGGCGGATG TTCGGTCAGG CCCTGGCGTT CCTGCCGCGG CAGCACTACC GCCGGGTGCT GGAACTGGGA TGCGGCGCGG GGGCGCTGGC GCGCGGCCTG GTCGTGCGCT GCGATCAGTA TGTCGGGCTT GATGCCGACG CCGAGGCGCT GGTCGAGGCG CGGGCCCTGC CGGCGCGCTT TGCCCGGACC GACTTCCTTC AGGGGCGGGT GCCCGATGAC ATTCCCGAGG GCCCCTTCGA TCTCGTCGTG CTGAACGGCG TGCTGCAGGA CCTGTCTCCC GAGGAACTGG AGCGGCTGGC GCTTCGCCTG CAGGGGGTCG CGCCCGCGGC GGACATCCTC TGCCTGCGCA GCCTGCTGTT CGAGGCGCCG GACGAGGCCT TCCGCCCTCA GGCGCGGCTG GGCGCGGCCC TTGGCCGGTC GCTGACGGCC TGCAACCTCG ACCGGCTGTT CCGCATCGAC GTCTTCGAGC CCGACCGCGC GGCCGCGGCC TGA
|
Protein sequence | MSVTLAQTLD RCLDIAGNPT VALSFPQRRM FGQALAFLPR QHYRRVLELG CGAGALARGL VVRCDQYVGL DADAEALVEA RALPARFART DFLQGRVPDD IPEGPFDLVV LNGVLQDLSP EELERLALRL QGVAPAADIL CLRSLLFEAP DEAFRPQARL GAALGRSLTA CNLDRLFRID VFEPDRAAAA
|
| |