| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_0889 |
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| Symbol | |
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| ID | 5083108 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009428 |
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| Strand | - |
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| Start bp | 906545 |
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| End bp | 908563 |
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| Gene Length | 2019 bp |
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| Protein Length | 672 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640482447 |
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| Product | transketolase |
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| Protein accession | YP_001167097 |
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| Protein GI | 146276938 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0021] Transketolase |
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| TIGRFAM ID | [TIGR00232] transketolase, bacterial and yeast |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.288392 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGACATAC AGAGCCTGCG CGAGCAGCAT CCCGATCACT GGAAGAAAGC CTGCGCCATC
CGCGCGCTGA CGCTCGACGC CGTGGCGGCG GCCAATTCCG GCCATTCCGG CATGCCGATG
GGCATGGCGG ACGTCGCGAC CGTCCTCTAC GAGAAGCACA TGGTCTTCGA CGCGCAGTCC
CCCGACTGGC CGAACCGCGA CCGGTTCGTG CTGTCCGCGG GTCACGGCTC GATGCTGGTC
TATTCGCTGC TTCACCTGAC CGGCGACCCC GAGTTCCCGA TCGAGCAGAT CAGGAACTTC
CGCCAGTGGG GCTCCCGAAC CGCTGGCCAC CCCGAGAACT TCCTCGCCAA GGGGATCGAG
ACCACGACCG GCCCGCTGGG CCAGGGCCTG GCGATGGCCG TGGGTCTCGC GATGGCCGAA
GAGTCGCTCC GCGCCCGCTG GGGGGCGAAG ATCATCGACC ACTACACCTA CTGCATCGCC
GGCGACGGCT GCCTGATGGA GGGGGTGAGC CAGGAGGCCA TCGGCCTCGC CGGCCGGCAC
GAACTGTCGC GCCTGATCGT GATGTGGGAC AACAACGGCA TCACCATCGA CGGCAAGGTG
GCGCTGTCGG ACCGCACCGA CCAGAAGGCG CGCTTCGCCG CCGCGGGCTG GGACGTGTTC
GAATGCGACG GCCATGATCC CGCCGACATC GACCGCGCGC TGACCGAAGC CAAGGCCTCG
AAGGGCCCGG CCTTCATCGC CTGCACCACG CATATCGCGC TCGGCTCTTC GGCTCAGGAC
ACCTCCAAGG GTCACGGCGC GCTGACCGAT GCCAAGCTGA TCACCGACAC CAAGGCCGCC
TATGGCTGGA CCGCCGGGGC CTTCGAGATC CCGGCCGACA TCAAGACGGC CTGGGAGACC
ATCGGCTCGC GCGGAGCCGA GGCCCGCAAG GCATGGGACG AGCGGTTCGC CGCCCTCTCG
GACAGCAAGC GCGCCCTCTT CCAGCAGCAG TTCTCCTGCG AGCCGCCGAA AAAGCTCGCC
GCCGCGATCC GCGCCGTGAA GAAGGACGCG GTCGAGAAGA TGCCGAAGGT CGCGACCCGC
CGCGCCTCGG AGATGGTGCT GGAAGCGGTC AATCCGATCA TGACCGAGAC CATCGGCGGC
TCGGCCGACC TGACCGGCTC GAACAACACC AAGACGGCCG ACCTCGGCGT GTTCGACCCG
ATCAACCGCA AGGGCCGCTA CGTCTATTAC GGCATCCGCG AGCACGGCAT GGCCGCGGCG
ATGAACGGCA TGGCGCTGCA CGGCGGCCTG CGCCCCTACG GCGGCACCTT CATGTGCTTT
GCCGACTACT GCCGCCCCGC CGTGCGCCTC TCGGCGCTGA TGCACATGCC GGTGGTCTAT
GTCTTCACCC ATGACTCGAT CGGTCTGGGC GAGGACGGGC CGACCCACCA GCCGGTCGAG
CATCTGGCCA TGCTGCGCGC GACGCCGAAC ATGCTGGTGT TCCGCCCGGC CGACCTGACC
GAGACCGCCG AGGCCTGGGA GATCGCGCTC TCCGAAAAGG CCACGCCCTC GGTGCTGGCG
CTGTCGCGGC AGAACCTGCC GGCGGTGCGC AAGACCCACA CCAACAAGAA CCTCGTCGCG
CAGGGCGCCT ATGTGCTCGA AGAGGCTACG GCCAAGCGTC AGGTGATCCT GATCGCCTCG
GGCTCCGAGG TCGAGGTGGC GCTGAAGGCC CGCGAGGCGC TCGAGGCCGA GGGCATCGGC
ACCCGCGTCG TCTCGATGCC CTGCATGGAG CTGTTCGCCC GGCAGGACGA GGCCTACCGC
CGCAAGGTTC TGCCGGCGGG CGCCGTCCGC ATCGCCATCG AGGCGGGTGT CCGCATGGGC
TGGGACCGCT GGCTTCTGGG CGAGCGCGGC CGCGAGGGCA AGGACGGCTT CATCGGCATG
TCGGGCTTCG GCGCCTCGGC CCCGGCCGAG CGGCTGTTCC AGGAGTTCGG CATCACGCCC
GAGGCGACCG TCGCCAAGGC CAAGGCCCTG CTCGGCTGA
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| Protein sequence | MDIQSLREQH PDHWKKACAI RALTLDAVAA ANSGHSGMPM GMADVATVLY EKHMVFDAQS
PDWPNRDRFV LSAGHGSMLV YSLLHLTGDP EFPIEQIRNF RQWGSRTAGH PENFLAKGIE
TTTGPLGQGL AMAVGLAMAE ESLRARWGAK IIDHYTYCIA GDGCLMEGVS QEAIGLAGRH
ELSRLIVMWD NNGITIDGKV ALSDRTDQKA RFAAAGWDVF ECDGHDPADI DRALTEAKAS
KGPAFIACTT HIALGSSAQD TSKGHGALTD AKLITDTKAA YGWTAGAFEI PADIKTAWET
IGSRGAEARK AWDERFAALS DSKRALFQQQ FSCEPPKKLA AAIRAVKKDA VEKMPKVATR
RASEMVLEAV NPIMTETIGG SADLTGSNNT KTADLGVFDP INRKGRYVYY GIREHGMAAA
MNGMALHGGL RPYGGTFMCF ADYCRPAVRL SALMHMPVVY VFTHDSIGLG EDGPTHQPVE
HLAMLRATPN MLVFRPADLT ETAEAWEIAL SEKATPSVLA LSRQNLPAVR KTHTNKNLVA
QGAYVLEEAT AKRQVILIAS GSEVEVALKA REALEAEGIG TRVVSMPCME LFARQDEAYR
RKVLPAGAVR IAIEAGVRMG WDRWLLGERG REGKDGFIGM SGFGASAPAE RLFQEFGITP
EATVAKAKAL LG
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