| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_0814 |
|---|
| Symbol | |
|---|
| ID | 5083504 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17025 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009428 |
|---|
| Strand | + |
|---|
| Start bp | 827873 |
|---|
| End bp | 829186 |
|---|
| Gene Length | 1314 bp |
|---|
| Protein Length | 437 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640482370 |
|---|
| Product | aminotransferase, class V |
|---|
| Protein accession | YP_001167023 |
|---|
| Protein GI | 146276864 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0520] Selenocysteine lyase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.294016 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGTCC TCGACATCGA CTATGTCCGC GCCTGCTTTC CCGCCTTGTC CGAGCCCGCC
CTGGCCGGAC AGGCCTTCTT CGAGAATGCG GGCGGGTCCT ACACCTGCCG GCAGGTGATC
GACCGGCTCA GCCGCTTCTA CCACCAGCGC AAGGTGCAGC CCTATGCGCC CTACGCCGCC
TCCCATGCCG CCGGGGCCGA GATGGACGAG GCGCGGAGCC GGCTTGCCGC GCTGATGGGG
GTGGATGAGG ACGAGCTGTC CTTCGGCCCA TCGACGTCGG CCAACACCTT CGTGCTGGCG
CAGGCCGTGC GCGGCTGGCT GAAGCGCGAG GGCGGCGCCG TGGTCGTCAC CGATCAGGAC
CACGAGGCCA ATTCGGGCGT CTGGCGCAGG CTGGCCGACG AGGGGATCGA GGTGCGGGAG
TGGCGGATCG ACCCGGACAC GGGGCATCTC GATCCCGCGG GCCTTGCGCA GCTCCTCGGC
GACGGGCGGG TGCGGCTGGT GTGCTTTCCG CATTGCTCGA ATGTCGTGGC CGAGATCAAC
CCGGTGGCCG AGATCTGCGC CATGGCGCGC GCGGCGGGCG CCTTCACCTG CGTGGACGGC
GTCAGCTATG CGCCGCACGG CCTGCCCGAC ATGGGCGCGC TCGGGGCCGA CATCTATCTC
TTCTCGACCT ACAAGACCTA CGGGCCGCAT CAGGGCCTCA TGCTGATCCG GCGCGAGGTC
GGAGAGTTGC TGCCCGCGCA AGGGCATTGG TTCAACGCAG GCACGCTCCA CAAGCGCTTC
ACGCCCGCGG GGCCGGATCA TGCGCAGGTC GCGGCCTGCG CGGGGCTTGC GGATTACATC
GACGCGCTGG CGGACCATCA TGCGGCCGCG GGGCAGCGCT CGGGCGGGGC GCCGTCGGTC
GATGGCGCGC ATCGGGTGCA ACGTGACGCC GAGCGCGCCC TGGCGGCCCC GTGCCCGTCG
CCTCTTGATC GCGCGCGCGA GGTGCACCGG CTGATGCGAG AGCACGAGAT CCGGCTGCTG
CGGCCGCTGC TCGACCAGCT CGCGGGGCGG AACGACGTGC GCCTGCTCGG CCCGAGCGAG
GCCGGGCTTC GGGCGCCGAC GGTGGCGCTG GCGCTTGACC GGCCCGCCGA GCAGGTTGCG
ACGGCGCTCG CGGCGCACGG GATCATGGCG AGCGGCGGGG ATTTCTACGC GGTGCGGCCG
CTGGAGGCGA TGGGGGTGGA TCGCACGCGC GGCGTGCTGC GGATGAGTTT CGTGCATTAC
ACCTCGGAGG CCGAGGTGGC GCAGCTGATG TTGGCGCTCG ACGCGGTGCT GTAG
|
|---|
| Protein sequence | MTVLDIDYVR ACFPALSEPA LAGQAFFENA GGSYTCRQVI DRLSRFYHQR KVQPYAPYAA
SHAAGAEMDE ARSRLAALMG VDEDELSFGP STSANTFVLA QAVRGWLKRE GGAVVVTDQD
HEANSGVWRR LADEGIEVRE WRIDPDTGHL DPAGLAQLLG DGRVRLVCFP HCSNVVAEIN
PVAEICAMAR AAGAFTCVDG VSYAPHGLPD MGALGADIYL FSTYKTYGPH QGLMLIRREV
GELLPAQGHW FNAGTLHKRF TPAGPDHAQV AACAGLADYI DALADHHAAA GQRSGGAPSV
DGAHRVQRDA ERALAAPCPS PLDRAREVHR LMREHEIRLL RPLLDQLAGR NDVRLLGPSE
AGLRAPTVAL ALDRPAEQVA TALAAHGIMA SGGDFYAVRP LEAMGVDRTR GVLRMSFVHY
TSEAEVAQLM LALDAVL
|
|---|
| |