| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_0804 |
|---|
| Symbol | |
|---|
| ID | 5083495 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17025 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009428 |
|---|
| Strand | + |
|---|
| Start bp | 816517 |
|---|
| End bp | 817641 |
|---|
| Gene Length | 1125 bp |
|---|
| Protein Length | 374 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640482362 |
|---|
| Product | transposase IS116/IS110/IS902 family protein |
|---|
| Protein accession | YP_001167015 |
|---|
| Protein GI | 146276856 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3547] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGATTGCGG CCGCCCGCCC CCAAACGTCG TACCAAATCT TGTATAGTAG CCTCAGGAGA
GAAGACGCCG AAAGGAGATT GACCATGGAC TACTATGCCG GCTTGGACGT TTCGCTGAGG
GAGATTTCGA TCTGCGTCAT TGACGCAGAT GGCAAGAGCA TTGCGCGAGG TTGTTGCCCA
GCCGACCCTG AGGGCGTCGC CGGGTGGTTT CGCGCAAGGT CGCTGTCGCC AAAGCAGATC
GTTCATGAAA GCGGACAGCT GTCGATTTGG CTTCAGCGCG GTTTGGAACG GCTGGGGCTT
CCGTCCGTGT GCATCGACGC CCGCAAGGCG CACAAGAGCC TGTCAGCTCG CCCCAACAAA
TCCGATGCCG CTGACGCGGA AGGCCTTGCG CAACTGGCTC GCACAGGGTG GTTCACCCCT
GTCCACGTGC GCAGCGAGAC ATCCGATGGG CTGCGTTGTC TGGTAGGTGC CCGTGCGCAG
CTGATCAGTC TCCGCAAGGA CCTTGAGGGC CACATCCGAG GAATTCTCAA GACCTTCGGC
ATCCGCCTGA CGGGTATCGG GAAAGGCGAC CAGCGGCAGG TCTTTCGCGA CCAACTCGCC
TCTGCGGGAG AGCGTGATCC AGTCTTGCGC GCAATCGCGG ACGCGTTCAT CTGCGCCCAT
GCCACCATTT GCCAGGCGGC AGCGGACCTT GATCGTGCCG TGAAAGAGAA CGCTGAGAAG
CATCCTGTTG CCCGCCGATT GATGACCATT CCCGGCGTCG GGCCCATCGT GTCGCTGAGC
TTTGTCGCGC TGGTCGACGA TCCTGCGAGG TTTCGTCGGG CTGTTGATGT CGGCGCTTTT
CTGGGCCTTA CCCCTCGGCG ATATCAGTCC GGAGAAATGG ATTGGTCCGG ACGTATCTCG
AGATGCGGCG ACAGGGCCAT GCGAAGCATG TTGTTCGAAG CCGCAACTGC TTTGATCAGT
CGAACACGGC GGTTCTCTGC GCTGAAAAGC TGGGCGGTCC GACTTGCTGG ACGGCGAGGG
TTTGCCAAGG CCGCCGTGGC CACCTCGCGG AAACTCGCAG TGCTGATGCT GACGCTCTGG
AAAAACGAGA CCGAATTCAA ATGGAAAGAG CGGGCCGTAG CCTGA
|
|---|
| Protein sequence | MIAAARPQTS YQILYSSLRR EDAERRLTMD YYAGLDVSLR EISICVIDAD GKSIARGCCP
ADPEGVAGWF RARSLSPKQI VHESGQLSIW LQRGLERLGL PSVCIDARKA HKSLSARPNK
SDAADAEGLA QLARTGWFTP VHVRSETSDG LRCLVGARAQ LISLRKDLEG HIRGILKTFG
IRLTGIGKGD QRQVFRDQLA SAGERDPVLR AIADAFICAH ATICQAAADL DRAVKENAEK
HPVARRLMTI PGVGPIVSLS FVALVDDPAR FRRAVDVGAF LGLTPRRYQS GEMDWSGRIS
RCGDRAMRSM LFEAATALIS RTRRFSALKS WAVRLAGRRG FAKAAVATSR KLAVLMLTLW
KNETEFKWKE RAVA
|
|---|
| |