| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_0645 |
|---|
| Symbol | |
|---|
| ID | 5082989 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17025 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009428 |
|---|
| Strand | + |
|---|
| Start bp | 647317 |
|---|
| End bp | 649875 |
|---|
| Gene Length | 2559 bp |
|---|
| Protein Length | 852 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640482202 |
|---|
| Product | pyruvate phosphate dikinase |
|---|
| Protein accession | YP_001166856 |
|---|
| Protein GI | 146276697 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0574] Phosphoenolpyruvate synthase/pyruvate phosphate dikinase |
|---|
| TIGRFAM ID | [TIGR01828] pyruvate, phosphate dikinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.211881 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCAGAAAA TCGAGCCTAT CGCCGACTTC GACCGCATCA CGCCCACAGC GGCGATCACC
TTGGGCACGC ACGGCTTCCG GGCCAAGTGC CTGCAGCGCC TCGTGCGGCT CGATTTGCCG
GTGCCCGTCA CCGTGGCCCT GCCCGCCACC ACCGTCCGCG CCATCGCCAC GGGCCATCCG
GTCGATTGCG CCGCGATCCT TGCCGATTTC GGCCCCACGC CCCTCGTGTC CGTCCGGCCC
AGCCCGGAAA ACTCCGACTG GGGCGGGCCG GCCACCGTGC TCAACATCGG CATGAACGCG
GCCCGCCACG CCGCGCTTGC CCGCATCCAC GGCGAAGAGG CCGCGGACGC GATCTATCTC
GGCTTCATCC AGAGCTACGC CATCCATGTC GCGCGCCTCG ATCCCGAGAC CTTCGACACC
GACGGCACCT CGTCCGAGGC GCTGAGGGCG GCGCTGCACG CCTGGCAGGA GGAGATGGAC
GAGCCCTTCC CGCAGGACCC GGCGCGGCAG CTCTCCGAGG TGCTGCGCTC GATGGCCCGC
GCCTGGGAGG GCACGACGGC GCGGCTGCTG CGCCAGGCCA AGGGCGCGCC CGCCGAGGCG
CGGCTTGGCC TCGTGGTGCA GGAGATGGCG CAGGATCTGG GGCAGGGGAT TTCGGGCTCG
GGGGTGATCC AGTTCGTCGA TCCCGCCACC GGCGCCCCGC AGGTGACGGG GCGCTTCTTC
AACCGCTCGC GCGCCTGGCA CGGCAAGGCC GAGACGCTCT ATCTCACCCG CGACCCGCGC
GGACCCTCGC TCGAGGAACG CGCGCCCGAG ATCTTTGCCG CGCTCTGCCG TCACGGCTCG
GTCTGCCGCG CCCGGCTGCG CGAGGAGATG CAGATCGAGT TCACCATCGA GGACAGCCGC
CTGGCCGTGC TCGATGCGGT GAAGGTGCAG AGATCCTCGC GGGCCGGGCT GAGGATCGCG
GTGGCGCTGG CCGAGGATCA GATCATCACC CGCGCCGAGG CGCTGCTCAG GGTCGAACCG
CGCGCGCTGT CCGAACTGCT CCACCCCCAG GTCGATCCGC GGGGGCGGCG CGACCGCTTC
GCCCGCGGCA TCCCGGCCAG CCCCGGCGCG GCGGTGGGGC GGATCGTCTT CTCGTCGCAG
GCCGCGCAGG CCTCGGCCGC GCGGGGCGAG CCCTGCATCC TCGTCCGGCG CGAGACCTCG
CCCGAGGACA TCCGCGGCAT GAACTGCGCC GCGGGCGTCC TGACCGAGCG CGGCGGCGTC
ACCAGCCACG CCGCGGTGAT CGCGCGGGGC CTGGGTCTGC CCTGCGTGGT GGGGGCCTCC
GAGATCCGGC TCGATGCGCG CGAGCGCCGC CTCGTGGCAC CCGACGGGCG CATCTTCCGC
GAGGGCGACC TCATCACCGT GGACGGCACC GCGGGCGAGG CGCTGGCGGG CGAGGCCGCC
ATGCTCGCGC CTGCGCTCGA CAGCTGCTTC CGCAAGCTCC TGTCCTGGGC CGACGAGATG
CGCGACATCG GCGTGCGGGC CAACGCCGAC ACGCCGGCCG ATGCGCTGGT GGCGCGCCAG
TTCGAGGCGC AGGGCATCGG CCTCTGCCGC ACCGAGCACA TGTTCTTCAC CGACGACCGG
CTCGTGGTGA TGCGCGAGAT GATCTTTGCC GACAGCGCGA CCGACCGCGC GGCGGCGCTG
GCCCGCCTCC TGCCGATGCA GCGGGCGGAT TTCGTGCAGC TGTTCGAGAT CATGCAGGGC
CATCCGGTCT GCATCCGCCT GCTCGACCCG CCCCTGCACG AGTTCCTGCC CCATTCGCGC
GAAGGGATGC TGGAGCTGGC CGAGGCGCTC GACCGGCCGC TTTCGGAAGT GACGCGGCGC
GTCGAGGCGA TGGCCGAGTT CAATCCGATG CTGGGGATGC GGGGCGTGCG CCTCGGCGTG
ACCATCCCCG AGATCTACGA CATGCAGGCG CAGGCCATCT TCGAGGCGAC GCTCGAGGTG
GCGGGCCGCG GCGATCCGGT GGTGCCGGAG ATCATGATCC CGCTCGTCTC GGCCCGCCGC
GAGGTCGAGC TGGTCAAGAC CCGGATCGAC GCGGTTGCGG CGGCCGTCCA CACGAAATAC
GGGCGCGACT TCGCCTACCG GCTGGGCGTG ATGGTCGAGA CGCCGCGGGC GGCGCTGCGG
GCCGGCGAGA TCGCGCAGCA CGCCTCGTTC CTCTCGTTCG GCACCAACGA CCTGACGCAG
ATGACCTATG GCCTCTCGCG CGACGATGCC GGTCGCTTCA TGAGCACCTA TGTCCAGAGC
GGGGTCTTTC CCGAGGATCC GTTCCACATC CTCGACGTGG ACGGGGTGGG GGAACTCTTG
CTGATCGGGG CCGAGCGTGG GCGCCGGACG AGGCCGGATC TGGTGGTCTC GATCTGCGGC
GAGCACGGGG GCGACCCCGA ATCGATCGAG TTCTGCCGCC GCGCGGGCTT TGATTATGTC
TCCTGCTCGC CATATCGGGT GCCCTTGGCT CGGCTGGCGG CCGCCCATCT GGCCATTCGC
GGCCGGATGG AGTCGAACGC CGAGAGATCA ATGCGTTAG
|
|---|
| Protein sequence | MQKIEPIADF DRITPTAAIT LGTHGFRAKC LQRLVRLDLP VPVTVALPAT TVRAIATGHP
VDCAAILADF GPTPLVSVRP SPENSDWGGP ATVLNIGMNA ARHAALARIH GEEAADAIYL
GFIQSYAIHV ARLDPETFDT DGTSSEALRA ALHAWQEEMD EPFPQDPARQ LSEVLRSMAR
AWEGTTARLL RQAKGAPAEA RLGLVVQEMA QDLGQGISGS GVIQFVDPAT GAPQVTGRFF
NRSRAWHGKA ETLYLTRDPR GPSLEERAPE IFAALCRHGS VCRARLREEM QIEFTIEDSR
LAVLDAVKVQ RSSRAGLRIA VALAEDQIIT RAEALLRVEP RALSELLHPQ VDPRGRRDRF
ARGIPASPGA AVGRIVFSSQ AAQASAARGE PCILVRRETS PEDIRGMNCA AGVLTERGGV
TSHAAVIARG LGLPCVVGAS EIRLDARERR LVAPDGRIFR EGDLITVDGT AGEALAGEAA
MLAPALDSCF RKLLSWADEM RDIGVRANAD TPADALVARQ FEAQGIGLCR TEHMFFTDDR
LVVMREMIFA DSATDRAAAL ARLLPMQRAD FVQLFEIMQG HPVCIRLLDP PLHEFLPHSR
EGMLELAEAL DRPLSEVTRR VEAMAEFNPM LGMRGVRLGV TIPEIYDMQA QAIFEATLEV
AGRGDPVVPE IMIPLVSARR EVELVKTRID AVAAAVHTKY GRDFAYRLGV MVETPRAALR
AGEIAQHASF LSFGTNDLTQ MTYGLSRDDA GRFMSTYVQS GVFPEDPFHI LDVDGVGELL
LIGAERGRRT RPDLVVSICG EHGGDPESIE FCRRAGFDYV SCSPYRVPLA RLAAAHLAIR
GRMESNAERS MR
|
|---|
| |