Gene Rsph17025_0543 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_0543 
Symbol 
ID5082811 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp546221 
End bp546934 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content66% 
IMG OID640482098 
Producthydrolase 
Protein accessionYP_001166754 
Protein GI146276595 
COG category[R] General function prediction only 
COG ID[COG1011] Predicted hydrolase (HAD superfamily) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCGGC GCATCACCAC CATCGCGTTC GACGCGGACG ACACACTCTG GCAGAACGAG 
GCCTTCTACC GGCTGACGCA GGAGCGTTTT GCGGCCCTGC TCGCCGACCA TGTCGAGGCG
GGCCGGCTGC ATGACCGGCT GCTCGAGGCC GAGCGGCGCA ACCTCGGCCA CTACGGATTC
GGCATCAAGG GCTTCATGCT GTCGATGATC GAGACCGCCA TCGAGGTGAC CGAGCAGCGG
GTTCCGGCCG CGGTGATCGG CGAGATCATC GCCGCAGGCC AGGAGATGCT GGCCCACCCG
ATCGAGCTTC TACCCCATGC GCGTCAGGCC GTGGAGGTCC TGGCGGCCGA CTTCCGTGTC
ATTCTTGTCA CGAAGGGCGA TCTTCTCGAC CAGGAGCGGA AGCTCGCCCA GTCGGGGCTG
GGAGAGATGT TCGACGCGGT CGAGATCGTT TCGGACAAGA ACGCGCGCGT CTATGACCGG
ATCTTCCGGC AGCACGGCGA CGGCCCGGAG CGCGCGCTGA TGGTGGGCAA CTCCTTGAAA
TCCGACGTTC TGCCACCGAT CGAGGCCGGG GGATTCGGCG TGCATGTGCC CCACGGCCTG
ACCTGGGCGC TGGAACATGC CGATCCGCCC GACGGGCACC CGCGGTTCTT CACGCTGCCG
GACCTCGCAG GGCTGGCCTC GCTCATCGAG ACCCTTAACG AGAATCCGCC GTAA
 
Protein sequence
MDRRITTIAF DADDTLWQNE AFYRLTQERF AALLADHVEA GRLHDRLLEA ERRNLGHYGF 
GIKGFMLSMI ETAIEVTEQR VPAAVIGEII AAGQEMLAHP IELLPHARQA VEVLAADFRV
ILVTKGDLLD QERKLAQSGL GEMFDAVEIV SDKNARVYDR IFRQHGDGPE RALMVGNSLK
SDVLPPIEAG GFGVHVPHGL TWALEHADPP DGHPRFFTLP DLAGLASLIE TLNENPP