Gene Rsph17025_0304 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_0304 
Symbol 
ID5084162 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp301864 
End bp302502 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content65% 
IMG OID640481859 
ProductOmpA/MotB domain-containing protein 
Protein accessionYP_001166519 
Protein GI146276360 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATGC TGCGCAGCTC CCTCCTCGCC GCACCGCTTG CCCTTCTTGC GGCCTGCGGT 
GACCATCCGG TCTCGTCCGA GATCAACGAC GGCACCTTCG GCAACGCCAC GATGAACAAC
TCGCTCCTGC AGATGGGCGA GATCGACGCG ACCCAGGCGC TCGGCCAGAG GTTCGCGTCC
GAGGTCGAGC CGACCATCAC CTTCCCGTTC GACAGCGCCC GGCTGACCCC GGAGGCCCAG
CGCGTCCTGC GCGAACAGGC CAACTGGATC CGGCAATTCC CCGAGGTTCG CTTCCGCGTC
TATGGCCACA CGGACCTTGT GGGATCTGCC TCCTACAACA AGTCTCTGGG CCTGCGGCGC
GCCAAGGCGG TGGTCGCCTT CTTCGCCTCG CAAGGCATCA GCCCCTCACG ATTGGAGGCG
CTTGTTTCCT ATGGCGAAAC AAGGCCGGTG ATTCCCGTCG CCACACCGGA AGAGCGCAAT
CGCCGGACCG TCACCGAGGT CTCGGGGTTC GTCGCGGGCC GAGGGATGTC GATCAACGGC
AAGTACATGG CGGTTGTCTT CCGGGAATAT GTAAGCGGCG CGACGCGCGT TCATCCTGCG
AACCGCGTGA TCGCCACGCA GGTCGCCCCC GGAGGCTGA
 
Protein sequence
MKMLRSSLLA APLALLAACG DHPVSSEIND GTFGNATMNN SLLQMGEIDA TQALGQRFAS 
EVEPTITFPF DSARLTPEAQ RVLREQANWI RQFPEVRFRV YGHTDLVGSA SYNKSLGLRR
AKAVVAFFAS QGISPSRLEA LVSYGETRPV IPVATPEERN RRTVTEVSGF VAGRGMSING
KYMAVVFREY VSGATRVHPA NRVIATQVAP GG