Gene Rsph17025_0143 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_0143 
Symbol 
ID5082551 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp144460 
End bp145344 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content68% 
IMG OID640481698 
Producthypothetical protein 
Protein accessionYP_001166359 
Protein GI146276200 
COG category[E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0697] Permeases of the drug/metabolite transporter (DMT) superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAAC AGAACACGCG GCTTGGCATC GGGCTCATGG TGCTCACCAC CTGCATCTTC 
GCCCTGCAGG ACGGCATTTC GCGCCACCTG GCCGAACATT ACAGCGTCTT CATGGTCGTG
ATGATCCGCT ACTGGTTCTT CGCGGCCTTC GTGATCGCTG TGGCCGCGCG GCAGGCGGGC
GGTCTCGCGC CGGCCGTCCG GTCGCGCTTT CCGGTTCTTC AGGTGCTGCG CGGGCTGCTG
CTGGCGGCCG AGGTCTGCAT CATGGTCCTG GGCTTCGTGA AGCTGGGCCT TGTCGCCAGT
CACGCGGTCT TCACCTGCTA TCCGCTGCTG GTTGCCGCGC TCTCGGGGCC GGTGCTGGGC
GAGCGGGTGG GCTGGCGCCG CTGGCTCGCC ATCGCGGCGG GCTTCGTGGG CATCCTCATC
ATCCTTCAGC CCGGAGTTGC CGTCTTCTCG CCCTGGGCGC TGATCCCGCT GGGAGCGGCG
TTGCTCTTCG CGATCTACTC GTTGCTGACA CGCTATGTCG CGCGCGGCGA CTCGGCGGCC
GTCAGCTTCT TCTGGACGGG GACGGTCGGC GCGATCGCCA TGAGCGCCGT CGGCCTCTGG
CACTGGGAGC CGATGGCCCC CCAGGACTGG CTCTGGATGG CGGCGCTGTG CTGTTCGGCG
GCGCTGGGCC ACTGGTTCCT GATCCGGGCC TACGAGGTGG CCGAGGCGAG CGCGGTGCAA
CCCTTCGCCT ATCTGCAACT TCCCTTTGCG GCGTTGCTCG GCTTCTTCGT CTTCAACGAG
CGTCCCGAGA TCAATGTCAT CCTCGGCGCC TGCGTGGTGG TTTCGGCGGG GCTCTTCACC
CTCTGGCGCG AGCAGGTGCG GGCACGGGCG CGCGCCGGAA GGTGA
 
Protein sequence
MTEQNTRLGI GLMVLTTCIF ALQDGISRHL AEHYSVFMVV MIRYWFFAAF VIAVAARQAG 
GLAPAVRSRF PVLQVLRGLL LAAEVCIMVL GFVKLGLVAS HAVFTCYPLL VAALSGPVLG
ERVGWRRWLA IAAGFVGILI ILQPGVAVFS PWALIPLGAA LLFAIYSLLT RYVARGDSAA
VSFFWTGTVG AIAMSAVGLW HWEPMAPQDW LWMAALCCSA ALGHWFLIRA YEVAEASAVQ
PFAYLQLPFA ALLGFFVFNE RPEINVILGA CVVVSAGLFT LWREQVRARA RAGR