Gene Rsph17025_0082 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_0082 
Symbol 
ID5082669 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp91624 
End bp92481 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content67% 
IMG OID640481636 
Productcitrate (pro-3S)-lyase 
Protein accessionYP_001166298 
Protein GI146276139 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2301] Citrate lyase beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCATC AGGCTCATCC CTTCCGCTCC GTGCTCTATA TCCCCGGCTC GAAGGAGCGG 
GCGCTGGAGA AGGCGCAGGG GCTGGCTGCC GATGCGATCA TCTTCGACCT CGAGGATGCC
GTGGCGCATG ACGAGAAGAT CCATGCACGC GACCTGCTGA GGAAGACGCT CGAGACCGCC
GACTATGGCC GGCGCATCCG CATCGTGCGG GTGAACGGAA TGGATACGGA ATGGGGCCGC
GACGACGTGG CGGCCTTTGC GGGCTCGAAG GCCGACGTGA TCCTGATCCC CAAGGTCTCG
TCGGCGACGG ATGTGCAGGC GGTGGCCGAC CTCATCCCCG ACGTGCCGCT CTGGGCGATG
ATGGAGACGG CGCTGGGGAT GCTGAACGCG GCCGAGATCG CCGCCCATCC GCGCCTGACG
GGCATGGTGA TGGGCACGAA CGACCTCGCC AAGGAACTGA CCAGCCGCTT CCGGCCCGAC
CGCCTCGCGC TGCAGACCGG CCTCGGCCTC TGCCTGCTGG CCGCGCGCGC GCACGGGCTG
ACCATCGTCG ATGGCGTCTA CAACGCCTTC AAGGACGAGG ACGGCCTGCG CGCGGAATGC
GAGCACGGCC GCGACATGGG CTTTGACGGC AAGACGCTGA TCCATCCCGC GCAGCTCGAG
ATTGCCAACG AGGTCTTCTC GCCATCGTCG GCCGAGATCG AGCTGGCCAA CCGCCAGATC
GCCGCCTTCG AAGAGGCAGA ACGCCACGGG CAGGGGGTGG CCGTGGTGGA TGGAAAGATC
GTCGAGAACC TGCATATCGT GACCGCGCGG CAGACTCTGG CCAAGGCCGA GGCGATTGCC
GCGTTCGGAG CAAGCTGA
 
Protein sequence
MAHQAHPFRS VLYIPGSKER ALEKAQGLAA DAIIFDLEDA VAHDEKIHAR DLLRKTLETA 
DYGRRIRIVR VNGMDTEWGR DDVAAFAGSK ADVILIPKVS SATDVQAVAD LIPDVPLWAM
METALGMLNA AEIAAHPRLT GMVMGTNDLA KELTSRFRPD RLALQTGLGL CLLAARAHGL
TIVDGVYNAF KDEDGLRAEC EHGRDMGFDG KTLIHPAQLE IANEVFSPSS AEIELANRQI
AAFEEAERHG QGVAVVDGKI VENLHIVTAR QTLAKAEAIA AFGAS