| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_3789 |
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| Symbol | |
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| ID | 5077937 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009427 |
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| Strand | - |
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| Start bp | 433184 |
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| End bp | 434911 |
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| Gene Length | 1728 bp |
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| Protein Length | 575 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640481512 |
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| Product | bacteriocin/lantibiotic ABC transporter |
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| Protein accession | YP_001166174 |
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| Protein GI | 146276014 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCAACA TGCAGAATGA TGCCCGGAAT GCCGGAAATG CGGGATCCTC GCCGAGTTTC
CGCGAACTGG CGCTGTGGTG GTCGCGCGTC CTCGGGCCAG ACGCGGGCTT CATACGTCTC
GCTCTGCTCT ATGGCGCGGC GATCTCGCTG CTTTCGCTGG CAACGCCGAT TTCTGTCCAG
CTCCTGATCA ATTCGGTTGC CAACACTGCC CTGCCCGCCC CGCTGTTCAC GCTCGCGGCG
ATCCTGTTCG TGCTTCTGCT GCTGTCAGGC GTCCTCGCTG CCTTCCGCGT CCACATGCTT
GCCATGTTCG AGCGTCGCTT CTTCGCGCGG CTCGTAGCGG AGATTACCTT GCGCGCCGTC
CATGCGCAGA ACCCGTTCTT CGTCGATGCG CGGCGCGGCG ACCTGTTCAA CCGGTTCTTC
GACATGGGCA TCGTCCAGAA ATCGCTGACG AGCCTGCTCA TCGGCGGCTT CACCATCGTC
CTGCAAAGCC TGGTCGGGCT GGTCGTGACC AGCTTCTATC ACCCCTTCTT CCTTGGCTTT
AATCTGGTTC TGGTGTTCGC CGTTGTCGTC ATCTGGCGGG TCTGGGCCAA TGCCTCGCTC
ACCAGCGCGG TGACCAAGAG TCACGCCAAG CACGCCGCCG CGCATTGGCT CGGCAGCGTC
GGCAGCTCGA ACGGCATATA CAAGTCGAGC CGCCACATGC ACTTCGCCAT CGACCGATCG
GAGGAGCTGA CGGCCCGCTA CGTCTCGTCG CACCGCCGCC ATTTCCGCTA CACCTTCGGG
CAGACCCTCG CGTTCCTGTT CCTCTATGCG CTAGCCAGCG CGGGCCTGCT TGCGCTCGGC
GGATGGCTGA TTCTTCAGGG CGAACTTTCC ATCGGCCAGC TCGTCGCGGC CGAGCTGATC
CTGTCCGGCG TGTTCTACGG CATCGCCCAG CTCGGCTCCT ATCTCGAAAC CTTCTACGAC
CTCGCTGCCA GCCTCGAGGA ATTGCACCTG TTCTGGGAAG TTCCGCAGGA ATCCGCGCCC
GATGCCACCG CCCCCAGCCC TCCCGACGGC GCGATCCGCC TGCGCGGCGT GCGCCACCAG
GGCCATCTGT TCGATTTCGC CGTGGAAAGC GGCGCCCAGG TCGGAGTCCT TGCCGCACCG
GGGGTGGAAC GCAGCCTCGT CGCCCTGCTC AAGCGCCTGG AAGTGCCCGA AAACGGCTTC
GTCTCGGTCG GCGGGGCCGA TCTTGGCGCC CTCGACATGT ACCGCCTCCG CTCGGACGTG
ATCGTGCTCG ACCGGCCTGC CATCGTCGAG ATGACGGTTC GCGAGTATCT CTCACTCAGC
GCTCCGGGTC GGCCGGAAGC CATGATCGAA GCACTTGAAC TCGTCGGCCT TGCCGGCCGC
GTCGGCGGTC TACCCGGTGG CCTCGACGCG CGCCTGTCGA ACTCGGGCTG GCCGCTGTCC
GTAGGGGAAA CCATGGCCCT CAAGCTGGCC GGTGCCGTGC TTGCCCGCCC GCGCGTTCTC
ATGCTCTCGC CGCTTTACGA CATGCTGCCT CCGGGCCGAC TGGATCGGGT CCTGGCCGCG
CTGCGCCCGC ATGGCACCAC CGTCCTCCAG TTCACGGAGA GGCCCGAAGG ACTCACCCGG
GACACATGGT TGTGGATCGG CCAGAAGTCG CAGCATCGCG CGCCCGACCT TGCCGCCGTC
CTCCCCTTCG CCAGCGCGGA AGACGCCGCC ATCGCAATGG AGGGCTGA
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| Protein sequence | MSNMQNDARN AGNAGSSPSF RELALWWSRV LGPDAGFIRL ALLYGAAISL LSLATPISVQ
LLINSVANTA LPAPLFTLAA ILFVLLLLSG VLAAFRVHML AMFERRFFAR LVAEITLRAV
HAQNPFFVDA RRGDLFNRFF DMGIVQKSLT SLLIGGFTIV LQSLVGLVVT SFYHPFFLGF
NLVLVFAVVV IWRVWANASL TSAVTKSHAK HAAAHWLGSV GSSNGIYKSS RHMHFAIDRS
EELTARYVSS HRRHFRYTFG QTLAFLFLYA LASAGLLALG GWLILQGELS IGQLVAAELI
LSGVFYGIAQ LGSYLETFYD LAASLEELHL FWEVPQESAP DATAPSPPDG AIRLRGVRHQ
GHLFDFAVES GAQVGVLAAP GVERSLVALL KRLEVPENGF VSVGGADLGA LDMYRLRSDV
IVLDRPAIVE MTVREYLSLS APGRPEAMIE ALELVGLAGR VGGLPGGLDA RLSNSGWPLS
VGETMALKLA GAVLARPRVL MLSPLYDMLP PGRLDRVLAA LRPHGTTVLQ FTERPEGLTR
DTWLWIGQKS QHRAPDLAAV LPFASAEDAA IAMEG
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