| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_3742 |
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| Symbol | |
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| ID | 5077890 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009427 |
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| Strand | + |
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| Start bp | 380293 |
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| End bp | 381276 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640481465 |
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| Product | transketolase domain-containing protein |
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| Protein accession | YP_001166127 |
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| Protein GI | 146275967 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0022] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGTCTG AAACCATGGG TTACAACGCC GCGATGGGGC TTGGCCTTGT CGAGGAGATG
CGGCGCGACG ACAGCATCTT CATCATGGGC CAGGGCGTCG TCACCGGCGG CTGGTTCGGC
ATGGAGAAGG GCCTGGTCGC GGAGTTCGGC AACGACCGGG TGCTTGACTG CGGCATTGCG
GAAGCATTCG AGGCGGGCCT GGCCGCAGGT GCTGCCATCG CCGGGATGAA ACCCGTCATC
AACATGGGCT TTGGCGACTT TGCGTTGATC GCAGGCGACG AGATCTATCA CAAGCTCGCC
AAGTGGCGTT ACATGCACGG CCTCGACGTG CCGATGACGG CGGTCATCAT ATTCCCCATC
GGCGCGATGG GCGGGGCAGG GCCGGAGCAT TCGTCGTGCA CGGAAGTCCT CGGCATGCAT
TTCCCAGGGC TCAAGGTGGT GGTGCCGTCC ACCGCGGAAG ACGCAAAGGG GCTGATGAAG
GCCGCACTTC GCGAGCCGAA CCCGGTCCTT TTCCACTCGG TCCAGGGGCT TGGCTGGAGC
CGAGGCGACG TACCGCTCGA CCCGGATTTC GTGGTTCCCA TCGGCAAGGC CGTCACGCGC
CGCCGGGGGG CTGACCTTTC CATCGTCACC TATGGCTCGA TGGCGCCGCG CTCGCTCAAG
GCTGCAGAAC GCCTCGCCAG CGAGGGCATA GACGCCGAAG TCATCGACTT GCGCAGCCTC
GTGCCGCTCG ACTGGGAACA CGTCCTCGAG TCCGTGTCCC GCACCCATCG CGCAATGGTC
GTCCACGAGG CCTTCCGCAC CGCCGGACCG GGCGCAGAGA TTGCCGCGCA GATCCAGGAG
CGCGCCTTCT TCGATCTGGA TGCGCCGGTG CTGCGGCTGG GAGCACGGGA CTTCCCCCTC
TGCCAGAACG CCGATCTCGA ACAGGCGGCC ATTCCATCCG TCGATGCCAT CGCCGCCGAA
GCTCGGCGTC TAGCCGCGAT CTGA
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| Protein sequence | MSSETMGYNA AMGLGLVEEM RRDDSIFIMG QGVVTGGWFG MEKGLVAEFG NDRVLDCGIA
EAFEAGLAAG AAIAGMKPVI NMGFGDFALI AGDEIYHKLA KWRYMHGLDV PMTAVIIFPI
GAMGGAGPEH SSCTEVLGMH FPGLKVVVPS TAEDAKGLMK AALREPNPVL FHSVQGLGWS
RGDVPLDPDF VVPIGKAVTR RRGADLSIVT YGSMAPRSLK AAERLASEGI DAEVIDLRSL
VPLDWEHVLE SVSRTHRAMV VHEAFRTAGP GAEIAAQIQE RAFFDLDAPV LRLGARDFPL
CQNADLEQAA IPSVDAIAAE ARRLAAI
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