Gene Saro_3709 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_3709 
Symbol 
ID5077857 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_009427 
Strand- 
Start bp345425 
End bp346090 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content66% 
IMG OID640481432 
ProductTetR family transcriptional regulator 
Protein accessionYP_001166094 
Protein GI146275934 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.0975739 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAGGC AGCGCATTCC CGGCAACGAA CGCCGGGCCC AGATCGTGAC CGCGGCACGC 
CGCGTCTTCT CCCGGCATGG ATACGACGGC GCCAAGACCC TCCAGATCGC GCGGGAGGCC 
AATGTCTCCG AAGCGCTCGT CTATCGCCAC TTCCCGAGCA AGCTAGCGCT CTATCGCGCG 
GTGCTGCGTC AGGTTTTCAT CGAGCAAGAC GAACGCTGGC GCGAGCAGGG CATCAGGGCC 
GATGGCACGA TGGCATTGGC CGCCGCGATT CACACGTTCA TCGCCGCCAG CGTGCACGAT 
GCCGATGATC CCCAGCGGAT CGACACGCAT CGAATGACGC TGGCCAGCCT GGCTGGGGAC 
GGGTCCTATG CCAGCCTCAT CTATCGCCGC TCGCAGCGTC GGAACATCAG CGCGATGGAA 
GCCGCATTTG CCTCGTCCCG TGCCGACGGC GGCATGCAGG GCGAGCCGAT TTCGGTTTCG 
GCCTCGGCCA TGTTCGTGGA ACACGTCGGC TCGATGATAG CCGCCATCCG GGCGCTTCCG 
CAGGGCGCGC AACCCTATGG CATCGAGGGC GACGAACTGG TCCGCCAGGC CACATGGTTC 
TGCCTGCGCG GCATCGGCAT GACCGACGCG GCAATCGCCA CTTATTTCGC GAAGGCGGCA 
GCCTGA
 
Protein sequence
MARQRIPGNE RRAQIVTAAR RVFSRHGYDG AKTLQIAREA NVSEALVYRH FPSKLALYRA 
VLRQVFIEQD ERWREQGIRA DGTMALAAAI HTFIAASVHD ADDPQRIDTH RMTLASLAGD 
GSYASLIYRR SQRRNISAME AAFASSRADG GMQGEPISVS ASAMFVEHVG SMIAAIRALP 
QGAQPYGIEG DELVRQATWF CLRGIGMTDA AIATYFAKAA A