Gene Saro_3698 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_3698 
Symbol 
ID5077846 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_009427 
Strand
Start bp332018 
End bp333199 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content66% 
IMG OID640481421 
Productalanine racemase domain-containing protein 
Protein accessionYP_001166083 
Protein GI146275923 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3616] Predicted amino acid aldolase or racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.836905 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCGCGA CCGACACACT AGACAAGACT GGCACCCAGA CTTCCGCTGT CCGGCTTGGC 
GATCTCGAAA CGCCCTGCCT CGTTCTTGAT GCCGACCGCA TGGATCGCAA CATAGCCCGC
CTTCGCGACC GCATCGCCGG CCTTGGCGTG ACCTTGCGCC CGCACCTCAA GACTGCGAAG
TCGGTCGAAG TCGCGCGACG CGTGATGGCC ACCAGCGAGG GACCGGCCAC CGTCTCGACA
CTGAAGGAGG CCGAGTTCTT CGCCGATGCC GGCGTGCGCG ACATCATCTA TGCGGTGGGA
ATTGCGCCGT GGAAGCTCGC CAAGGTAATC GAACTGCGCA AGCGCGGTGT GGACCTGGCC
GTGGTTCTGG ACACTGTGGA ACTGGCGCAG GCTGTCGCCG CGGCTTCGCG CGAGAGCGGG
ATGGCGATCC CCGCATTGAT CGAGATCGAC TGCGACGGCC ACCGCTCCGG CGTTTTGCCG
CGAGATTCCG AGCGACTGCT GGCGATCGGC AAGGCCCTGG TCGAGGGGGG TGAACTGCGC
GGCGTACTTA CGCACGCCGG CGGCAGCTAT GCCGCGCGCG GAGAAGAAGC CTTGCGGAAC
GCGGCGGAGG AAGAGCGAGC CAGCGTGGTG AACGCTGCGG CAATCCTGCG TGACGCCGGG
TTGCCCTGCC CCGTCGTCAG CGTCGGCTCC ACGCCGACCG CGCACCATGC CACCGACCTG
ACAGGCGTGA CTGAAGTGCG CGCGGGCGTG TTCGTGTTCT TCGATCTCGT AATGACCGGC
ATCGGAATTT GCACGGTGGA CGACATCGCC ATCTCGGTGC TGGCAACCGT CATCGGCCAC
CAGCGCGAAA AGGGCTGGAT ACTGGTCGAT GCCGGCTGGA TGGCAATGTC GCAGGATCGC
GGCACAGCGA AGCAAGTGGT CAACCAGGGC TATGGCGTCG TCTGCAAATG CGACGGCACG
CCCTACGCGG ACCTGATCCT GGCAGACGCC AACCAGGAAC ATGGCATCAT CATGGTGCGC
CCCGGATCGG ACGGTACGCT ACCCGATCTC GCCATTGGCG ACCGGGTGCG GATTCTGCCC
AACCACGCCT GCGCCACGGG CGCGCAGCAT CGTCGCTACA ACGTCGTTCA CGGCACCTCG
GACGTGGTGA CCGGCGAATG GCAGCGCTTT GGAGGCTGGT GA
 
Protein sequence
MSATDTLDKT GTQTSAVRLG DLETPCLVLD ADRMDRNIAR LRDRIAGLGV TLRPHLKTAK 
SVEVARRVMA TSEGPATVST LKEAEFFADA GVRDIIYAVG IAPWKLAKVI ELRKRGVDLA
VVLDTVELAQ AVAAASRESG MAIPALIEID CDGHRSGVLP RDSERLLAIG KALVEGGELR
GVLTHAGGSY AARGEEALRN AAEEERASVV NAAAILRDAG LPCPVVSVGS TPTAHHATDL
TGVTEVRAGV FVFFDLVMTG IGICTVDDIA ISVLATVIGH QREKGWILVD AGWMAMSQDR
GTAKQVVNQG YGVVCKCDGT PYADLILADA NQEHGIIMVR PGSDGTLPDL AIGDRVRILP
NHACATGAQH RRYNVVHGTS DVVTGEWQRF GGW