| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_3629 |
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| Symbol | |
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| ID | 5077777 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009427 |
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| Strand | - |
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| Start bp | 253867 |
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| End bp | 256290 |
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| Gene Length | 2424 bp |
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| Protein Length | 807 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640481352 |
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| Product | TonB-dependent receptor, plug |
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| Protein accession | YP_001166014 |
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| Protein GI | 146275854 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.824698 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCAAGA CGGAACTGCG CACCAGCCTG CTGCGCGGAT CGATCCTTGC GCTCGGGGCG
CTTGCGCTCG CGCCGGCGGC CTACGCCGAA GAGGATGCGC AGCAATCCGC AGGCGAGGGC
CAGCAGGCCT CGGTCCAGGA AATCATCGTC ACCGCCCAGC GCCGCGAGGA AAGCCTGCAG
AAGGTGCCCG TGGCCGTGAC CGCCATCGGC TCGGAACAGC TCGCCGCGCT GCGCGTCAAC
AGCGTGCGCA ACCTCGCCGG CCTCGCGCCG AGCCTCCAGC TCAACACGCA AGGGCAGCAG
TCGAACCCCA CGATCATCAT CCGCGGCGTC GCCTCGGGCA CGTCGAGCAA CTCGGTCGAT
CCCAAGGTCG GCATCTACAT CGATGGCGTC TACATCGGCC GCGCGGTCGG CTCGCTGCTC
GATTTCAGCG ACATCCAGCG CGTCGAAGTG CTGCGCGGGC CGCAGGGCAC ACTTTTCGGC
CGCAACGCCA CTTCGGGCGC GATCAGCATC GTCACCGCCG CGCCCAAGGG TGAATGGGGC
GTGCGCGCGA CCGGCTCCTA CGGTAACTAC GATGCCTGGC GCGGCAAGGT CTCGCTCGAC
CTGCCGCAGA TCGGCCCGTT CTCGGTCCGC CTCTCCTACC TGCATGACGA GATCGACGGC
GACGTCGCCA ACACCATGGC GGACAAGGGC CTGAACCTGT CCCTGCGCGC GCCCGAATTC
GGCACGCAGA AGTTCGTGAA GCGCCTTGGC TATCGCAACG TCGACGGCGG GCAGGTCGCG
GTGCGCGGCG AATTCGGCAA CCTTACCGCC GACTATCGCT TCGACTATAC CGACTCCCAC
GGTTCGGGCC GCGCGATGCA GAGCTTCGGC GTCATCCCCG ATGCCTCGGG CCAGCTGCTT
GCCCCCATCG TCGCGCTCCA GCCGTTCTTC GGCGGAACGA CCAACTATGG CGTCGACGGC
CCGCTCAAGT CGGTCGCCGC CGCGACCAGC GACGAGCATA CGGTGACGCA GGGCCACAGC
CTGACGCTGA CACTTGCCGC AAACGACAAC CTCACCGTCA AGTCGATCAC CGCGTTCCGC
AAGTTCCGGC AGGACCCGGT GGTCTTCGAC CTCGGCTCGG CCGGCGGCAT GCGCTTCACC
TTCCAGCAGC TCGGCGCGCT GATCACGCCC GGCCTGACGC CGGAACAGAT CCAGGCGGCC
CTGTTCAACC CGGCCAACCT GCCCGGCCCG AACGACTACT TCTTCCCGCT GCTCAGCGCC
CGCGCGACCA GCCAGAAGCA GTTCAGCCAG GAACTGCAGT TCCAGGTGAC GACCGACCAG
TTCGATCTCA CCGCCGGCCT GTTCTACTTC CACGAACGCT CGCCCGGCAC CGAAGTTCTC
GGCATCCTCT CGCCAGCGCC CTCCGCCACG ATCGTGCCAA GCGCGCTCGA TGCGGTCTTC
GGCAGCGGCA TCACCCGCAC CATCGGGGTC AACGATTCCA TGGCGGGATA CGGCCAGCTC
ACCTGGCACC TGACCGACAC TTTCGACATC ACCGCGGGCC TGCGCGGCAC GATCGACGAT
CGCGAGCTGA ACATCCTCGT GATCTCGGGC GCGCAGGGTG GTTCGCTGGG CGTGGGCGAC
TACAAGGCGA CCTACAAGAA GCTGACCTAC ACCGGCATCG CCACCTGGCG CCCGACCGAG
CAGACCACGC TTTTCGCCAA GGTCGCCACC GGCTACGTCT CGGGCGGCAT CCTCAGCGGC
ATTCCCTACC GGCCTGAAAA CCTGACGTCA TACGAAGTGG GCGCTAAGAC CCAGTTCCTC
GACAACAAGG TGCGCCTCAA CGTCGCCGCG TACTACAACG ACTACAAGGA CCTGCAGACG
CAGAACTTCA TCAACGGACG GCAGTTCTTC GACAACGCGG GCAAGGCCAA GATCAAGGGC
TTCGAAGCCG AACTCGACAT CGTCCCGGTC CAGGGCCTGA ACCTGTCGGG CAGCGTCGGC
TATACCGACT TCGACTACAA GACCTTCATC CTCAACGGCG AGGATGTCGC CTCGTTCGCG
CGGCCGACCT ACTTCTCGAA ATGGACGGGC CGCGCTGCGG CGGTCTACAA TTCGCCCGAT
TTCGGGAACG ATGGCGGGCA TGTGACGGCG CTGGTCGAAG GGCGCTATCG CAGCTCCTAC
TACCTCACCT CCACCCCGCT GCGGAGCATC CTGACCGGGC AGCCCGCGCT CGAGGACCTG
AACCGCCAGC CTGGCTACTG GCTGGTCAAC GGTCGCCTCG GCGTCGCCGA CGTGCCGCTC
GGCGGGGCGC GCATGTCGCT CTCCGTGTTC GGCGACAACC TGTTCGACGA ACGCTATGTG
GGCTTCGGTG CGCCGGTGCT GCTGTTCACC GGCAACTACG AACGCGGCCG TACTTACGGC
GTGGAACTGG GCGTCAGTTT CTAA
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| Protein sequence | MTKTELRTSL LRGSILALGA LALAPAAYAE EDAQQSAGEG QQASVQEIIV TAQRREESLQ
KVPVAVTAIG SEQLAALRVN SVRNLAGLAP SLQLNTQGQQ SNPTIIIRGV ASGTSSNSVD
PKVGIYIDGV YIGRAVGSLL DFSDIQRVEV LRGPQGTLFG RNATSGAISI VTAAPKGEWG
VRATGSYGNY DAWRGKVSLD LPQIGPFSVR LSYLHDEIDG DVANTMADKG LNLSLRAPEF
GTQKFVKRLG YRNVDGGQVA VRGEFGNLTA DYRFDYTDSH GSGRAMQSFG VIPDASGQLL
APIVALQPFF GGTTNYGVDG PLKSVAAATS DEHTVTQGHS LTLTLAANDN LTVKSITAFR
KFRQDPVVFD LGSAGGMRFT FQQLGALITP GLTPEQIQAA LFNPANLPGP NDYFFPLLSA
RATSQKQFSQ ELQFQVTTDQ FDLTAGLFYF HERSPGTEVL GILSPAPSAT IVPSALDAVF
GSGITRTIGV NDSMAGYGQL TWHLTDTFDI TAGLRGTIDD RELNILVISG AQGGSLGVGD
YKATYKKLTY TGIATWRPTE QTTLFAKVAT GYVSGGILSG IPYRPENLTS YEVGAKTQFL
DNKVRLNVAA YYNDYKDLQT QNFINGRQFF DNAGKAKIKG FEAELDIVPV QGLNLSGSVG
YTDFDYKTFI LNGEDVASFA RPTYFSKWTG RAAAVYNSPD FGNDGGHVTA LVEGRYRSSY
YLTSTPLRSI LTGQPALEDL NRQPGYWLVN GRLGVADVPL GGARMSLSVF GDNLFDERYV
GFGAPVLLFT GNYERGRTYG VELGVSF
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