| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_3601 |
|---|
| Symbol | |
|---|
| ID | 5077750 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Novosphingobium aromaticivorans DSM 12444 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009427 |
|---|
| Strand | + |
|---|
| Start bp | 224846 |
|---|
| End bp | 225853 |
|---|
| Gene Length | 1008 bp |
|---|
| Protein Length | 335 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640481325 |
|---|
| Product | Rieske (2Fe-2S) domain-containing protein |
|---|
| Protein accession | YP_001165987 |
|---|
| Protein GI | 146275827 |
|---|
| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.022726 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCGGTC AGGAACTGAT CGACTGGCGC ACCGCCCCTG TCGAAGGCCG CGCATCCGTG
GAGGAACGCA ATCTCGACAT CGGCTTCCCT CTGGGCTGGT ACGCGATCGA CCTTTCGGCG
AACCTCGCGG TCGGCGAAGT GCGCCCGCTG CGCTACTTCT CGAAGGACCT CGCCATGTGG
CGCGGCGAGG ACGGCCAGGT TCGCGTGATC GACGCCTATT GCAAGCATCT GGGCGCGCAC
ATGGGCCACG GCGGCAAGGT TCACGGCAAC CTGCTGGAAT GTCCGTTCCA CGCCTGGCGC
TATGACGGCG AGGAGGGGAC CGTGAAGGAC ATCCCCTATT CGAAGTCGAT CCCGCCGCAG
GTGAAGCGCA AGTGCACCCG TACCTGGCAC GTGACCGAGG CCAACCGCTG GATCTGGCTG
TGGTATCATC CCGAGGACGT GGCCCCGCTA TTCGAGGTGG TGCACCTGCC CGAGGCGACC
GATCCCGAGT GGACCGATTA CGACATCTAC GAATGGAACG TCTACGGTTC GATCCAGAAC
ATGGCCGAGA ACGGCGTGGA CGTGGCGCAC TTCAAGTACA TCCACGGCAC CGCCAACGTG
CCGCTGGGCG ATCTGCGCTG GGGCGACTGG GGCCGCGGCG CCGACGTGAA GGCCAAGATG
GGCACGCCGT GGGGCGAGGT CGACGGCCAG ATCAGCTACG ACACGATGGG GCCGGGGCAG
AGCTGGACGC GCTTTACCGG CATTTCCGAA ACGCTGCTCG TGGCCTGCAT CACGCCGGTC
GAGCTTGACC ATGTCCATGT GCGCTTCTGC TTCACCCAGC CGCGTTCGCA GGCCGAGGGC
GAGCGGGCGG GCGTCGCCAA GGCGATCATC CGCGACATCT GCAAGCAGTT CGACCAGGAC
AAGATCATCT GGGACCGCCA GAAGTTCGAG CCCAACGCGC TGATCTGCGA AGGCGACGGT
CCGATCGCGC AGTTCCGCAA GTACTACTCG CGCTACTACG TCAAGTAA
|
|---|
| Protein sequence | MRGQELIDWR TAPVEGRASV EERNLDIGFP LGWYAIDLSA NLAVGEVRPL RYFSKDLAMW
RGEDGQVRVI DAYCKHLGAH MGHGGKVHGN LLECPFHAWR YDGEEGTVKD IPYSKSIPPQ
VKRKCTRTWH VTEANRWIWL WYHPEDVAPL FEVVHLPEAT DPEWTDYDIY EWNVYGSIQN
MAENGVDVAH FKYIHGTANV PLGDLRWGDW GRGADVKAKM GTPWGEVDGQ ISYDTMGPGQ
SWTRFTGISE TLLVACITPV ELDHVHVRFC FTQPRSQAEG ERAGVAKAII RDICKQFDQD
KIIWDRQKFE PNALICEGDG PIAQFRKYYS RYYVK
|
|---|
| |