| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_3530 |
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| Symbol | |
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| ID | 5077679 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009427 |
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| Strand | + |
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| Start bp | 145800 |
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| End bp | 148157 |
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| Gene Length | 2358 bp |
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| Protein Length | 785 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640481254 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001165916 |
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| Protein GI | 146275756 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGTGT CACGTGCAAT CCAGTTGATG AGCGGTCTTT CCGCCATCGC GCTCGCGGCT
GTTCCCGCCG GGGCAATGGC GCAGGCCGCG CCCGATCAGG CCCAGGCCGC TGATGCGCCC
ACCGGCGGCA TCGGCGAAAT CATCGTCACC GCGCAGAAGA AGGCGGAAAG CATCCAGACC
GTGCCGATCT CGATCGCGGC GGTCGGCGGC GAACAGCTTT CGGCAATGAA CGTCACCACG
CTCCAGGCAC TTCAGGGCTC GGTCCCGAAC GTCCAGATCG ACAACTTCGC CAATACGCCC
AACAACGCGG TCTTCACCAT TCGCGGCATC GGCGTGATCG AACCCGATCC CTATGCCGGC
AACACCGTGT CGATCGTGGT CGATGGCGTG CCGCAGTTCT TCTCGATGGG CGCGCTGCTC
GACACCTACG ACACCAACCG GGTCGAGATC CTGCGCGGTC CCCAGGGCAC CCTGTTCGGC
GCAAACACCA CCGGCGGCGT CGTCAACGTC GTGACCAACC AGCCGGACGG CAAGTTCGAC
GGCTACGTCA AGGGCACCTA CGGCAACTGG AACCGCTTCG ACATCAGCGC CGCCGTGGAA
GCGCCGCTGG TCGAGGACAC CCTCAGCCTC AAGGTCTCGG GCATCCACAC CCAGCGCGAT
GGCTGGACGA CCAACGTGTG GAACGGCGAA GACATGGGCC GCAAGAACGT CGATGCGGTG
CGCGGCCAGC TCTACATCAC GCCCAACGCC GATCTCAGGA TCACGCTCCA GGGTGAATAC
GTCGCCGCGC GCAACGGCGC GCCCATCGTC GTCAACGGCG GCCTGCCCGG CGAAGGCAAC
TACGTTCCCG AAGGCACGTT CTGGAACGGC GCCAAGCTGC CGATGTACCA GAGCCCCTGC
TCGGTCGAGG GCCAGCCCTG CAAGGCGCCC GACAAGTACT ACTCCGGCAA CAACGAAGTG
CCCGACCAGT CGGACATGAC GACGAAGTTC TTCGTCGGCA CGATCCAGTA CGACAACACC
CCGCTGGGCG ACATCACCGC GATCACCGGC TACAAGCGCT TCACGCTGTT CGAATACACC
GACCAGGACG GCACCGCGAA GACCAACAAC GCAACGCGCC GCCGCACCCG CGGCTGGCAG
TTCAGCCAGG AACTGCGCAG CGCCTTCGAG GCGGGAGACA ATTTCAACGC CGTCGCGGGC
CTGTTCTACC TGAAGACGCA CTACAACCAC TACCAGATGT ACCACCTGGA CTTCGCCCTT
CCCGGCCTCG TCCAGTACAA CGAACAGGAC CAGGGCACGG AATCGTTCTC GGCCTTCCTG
CAGACCTACA CCCAGCTTAC CGACCAGCTG AAGCTGTCGG CCGGCGTGCG CTACACGCAT
GACAGCGTGA ACGCCCGCTC CACGCTCGAC TACGGCGTCG GCGCGCCCGC GCTCACCGAT
CCGAACTGGG CCATCATCCC GACCATCGTC GTCGATGGCG AGACTCTCCA GGTCGGCCGC
GACCTTCGCA CCGGCCCGCA CGACATCGAC GTCGGCGGCA AGAAGAGCTG GGACAACGTC
GGCTGGAAGC TCGGCCTCGA TTACGAGATC GGCCAGAACC AGATGGTCTA TGCAAGCTGG
GCGCGCGGCT TCAAGTCGGG CGGCTTCACC GGCCGCATCG GCACCGCGTC GGACGGCGAC
ACGCCCTACG GCCCGGAAAA GGTCGATACC TTCGAGGTGG GCCTCAAGGC CGACTTCCTC
GACCGCCACG TGCGCACCAA CCTCGCGGTG TTCTACACCA ATTACCGCGA CATGCAGGTC
GCCCAGATCT ATTTCGATCC CGATACCAAC ACTCAGGGCA ACCGCATCCT CAACGCCGCC
AAGTCCGAGA TCAAGGGCTT CGAACTTGAA GTCCAGGCGA TCCCGTTCGA AGGCCTCACC
CTGCGCGGCT CGCTCGCCTA CCTCGACACG AAGTACAAGA GCTTCCTCTA CTTCGATCCG
GTCGCGGAAG AGTACCTCAA CCTCAAGGGC TACGCGCTCC AGAACGCGCC GAAGTGGGCT
TCGACGCTTG GCCTCAACTA CACCAAGACG ATGGACAACG GGAACTCGAT CGTTGCCGAT
GTAAGCTGGA TGTACACCGG GCAGAAGTTC TACACTGCCG TGGTCAACAC CCCGCGCTCG
TCGATCCAGC CGACCTACTA CGTCGACGGC ATGCTGACCT GGTACGGCCC GGACAAGCGC
TACTCGATCG GCCTGTGGGG CAAGAACCTG TTCGACAAGC GCTATATCTC CACCGTCTAC
GACAGCCCCG GCTACATGGG CCTCGTCGGC TACGCACCGC CGCGCCAGTT CGGCGTTTCG
GTCGGCTACA ACTTCTGA
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| Protein sequence | MKVSRAIQLM SGLSAIALAA VPAGAMAQAA PDQAQAADAP TGGIGEIIVT AQKKAESIQT
VPISIAAVGG EQLSAMNVTT LQALQGSVPN VQIDNFANTP NNAVFTIRGI GVIEPDPYAG
NTVSIVVDGV PQFFSMGALL DTYDTNRVEI LRGPQGTLFG ANTTGGVVNV VTNQPDGKFD
GYVKGTYGNW NRFDISAAVE APLVEDTLSL KVSGIHTQRD GWTTNVWNGE DMGRKNVDAV
RGQLYITPNA DLRITLQGEY VAARNGAPIV VNGGLPGEGN YVPEGTFWNG AKLPMYQSPC
SVEGQPCKAP DKYYSGNNEV PDQSDMTTKF FVGTIQYDNT PLGDITAITG YKRFTLFEYT
DQDGTAKTNN ATRRRTRGWQ FSQELRSAFE AGDNFNAVAG LFYLKTHYNH YQMYHLDFAL
PGLVQYNEQD QGTESFSAFL QTYTQLTDQL KLSAGVRYTH DSVNARSTLD YGVGAPALTD
PNWAIIPTIV VDGETLQVGR DLRTGPHDID VGGKKSWDNV GWKLGLDYEI GQNQMVYASW
ARGFKSGGFT GRIGTASDGD TPYGPEKVDT FEVGLKADFL DRHVRTNLAV FYTNYRDMQV
AQIYFDPDTN TQGNRILNAA KSEIKGFELE VQAIPFEGLT LRGSLAYLDT KYKSFLYFDP
VAEEYLNLKG YALQNAPKWA STLGLNYTKT MDNGNSIVAD VSWMYTGQKF YTAVVNTPRS
SIQPTYYVDG MLTWYGPDKR YSIGLWGKNL FDKRYISTVY DSPGYMGLVG YAPPRQFGVS
VGYNF
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