Gene Saro_3514 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_3514 
Symbol 
ID5077663 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_009427 
Strand+ 
Start bp125506 
End bp126144 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content64% 
IMG OID640481238 
Producthypothetical protein 
Protein accessionYP_001165900 
Protein GI146275740 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0698] Ribose 5-phosphate isomerase RpiB 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.994561 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGATCG CGCTCATCAT CGAGAACAGC CAGGCCGCCA AGAACGCCGT GGTCCACGAA 
GCCCTGACCA CCGTGGCCGA ACCGCTGGGC CACAAGGTCT TCAACTACGG AATGTACACG 
GCAGAGGACA AGGCCTCGCT CACCTACGTG ATGAACGGCC TTCTCGCGGG CATCCTGCTC 
AATTCCGGCG CCGCCGACTT CGTGGTGACC GGTTGCGGCA CCGGCATGGG CTCGATGCTC 
GCCGCCAACG CCATGCCCGG CGTATTCTGC GGCCTGGTGA TCGATCCGAC CGACGCGTTC 
TTGTTCGGCC AGATCAACGA CGGCAACGCA ATCTCGATGC CCTATTCCAA GGGCTTTGGC 
TGGGCCGCCG AACTGAACCT CCAGGACGTC TACCGCAAGC TGTTCGACGG CGAGCGCGGG 
CTTGGCTATC CCCGCGAGCG CGCCGAGATC ATGCGCAAGA ACCGCGGCAT CCTGCGCGAG 
CTGAAGGACG CATCCTGCCG CGACATGCTG ACCGTGCTCA AGACCGTGGA CCAGGACCTG 
CTGCGGGCCG CAATCGCCGG CGAGAAGTTC GCCGAACTGT TCTATCCCAA CTGCAAGGAC 
GACGCGATCG CGAACTACCT GCGCAGCCTG GACGCCTGA
 
Protein sequence
MKIALIIENS QAAKNAVVHE ALTTVAEPLG HKVFNYGMYT AEDKASLTYV MNGLLAGILL 
NSGAADFVVT GCGTGMGSML AANAMPGVFC GLVIDPTDAF LFGQINDGNA ISMPYSKGFG 
WAAELNLQDV YRKLFDGERG LGYPRERAEI MRKNRGILRE LKDASCRDML TVLKTVDQDL 
LRAAIAGEKF AELFYPNCKD DAIANYLRSL DA