Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Saro_3460 |
Symbol | |
ID | 5077609 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Novosphingobium aromaticivorans DSM 12444 |
Kingdom | Bacteria |
Replicon accession | NC_009427 |
Strand | + |
Start bp | 62816 |
End bp | 63553 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640481184 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001165846 |
Protein GI | 146275686 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGCGTGC TGGACGGCAA GGTCACCTTT GTCACTGGCG GCGCGTCGGG CCTCGGAGAG GCCATCGCGC GGGCCTTTGC GGCAGAGGGC GCATCGGTTG TCGTCGCCGA TATCGATGTG GCCGGCGGCG AGACGCTGGC GGCGCAAATC GGCGCACAGT TCGTTCCGCT CGACGTGACG CAGGAGGGAT CGTGGGCCGA AGCCGTCGCT CCGTTCGAAC GGATCGACGT GCTGGTCAAC AACGCCGGGA TCACCACGCT CGGCTCGGTC GAGGAAATCA CGCTCGACCA GTTCCGGCAC GAGCTGGACA TAGACGTGCT GGGCGTGTTC ATGGGCATCC AGGCCACCCT GCCCCGGATG AAGACGCACG GCGGGTCGAT CATCAACATG TCCTCGCTCT CGGGCGTGAA GGCATCGGCC AACCTCGTCG CCTACAATGC GGCGAAGGCG GCGGTGACGC TGATGACGAA GTCCTGCGCG CTGCACTTTG CCGACAAGGG CTATGGCATC CGTTGCAACT CGATCCACCC CGGCGCGATC CACACGCCGA TCATCGACAA GGTGCTGGCC CAGTCCGACG ATCCTGACGC GCTCTACCGC AGCTTCGTCG ATGTCCATCC GGTGAAGCGG CTGGGCAAGC CGGAGGAGAT CGCGGCGATC GCGGTCTATC TCGCCAGCGA TGCCAGCGCC TTTGCAACGG GCGCGGAGTT CCGCGTGGAC GGGGGCGCGT CCATATGA
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Protein sequence | MGVLDGKVTF VTGGASGLGE AIARAFAAEG ASVVVADIDV AGGETLAAQI GAQFVPLDVT QEGSWAEAVA PFERIDVLVN NAGITTLGSV EEITLDQFRH ELDIDVLGVF MGIQATLPRM KTHGGSIINM SSLSGVKASA NLVAYNAAKA AVTLMTKSCA LHFADKGYGI RCNSIHPGAI HTPIIDKVLA QSDDPDALYR SFVDVHPVKR LGKPEEIAAI AVYLASDASA FATGAEFRVD GGASI
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