| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_4016 |
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| Symbol | |
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| ID | 5077546 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009426 |
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| Strand | - |
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| Start bp | 181689 |
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| End bp | 182408 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640481121 |
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| Product | lytic transglycosylase, catalytic |
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| Protein accession | YP_001165783 |
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| Protein GI | 146275622 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.0926261 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTCTCGCT TCGCTCCTTC TGCCATTGCG GCCAGTGGCG GAGATGGTCC TGTCGAGGTT
GCGCTACGCG CTCATTTGCA AGGTATCAGC CAACCTGTCT ATATAATTGA TAAAATTGGC
AAAGGAGCCA GCGCAAGCCA GAACCCGCTG TCTTGTCCTG GGAATGGTTA CCTCCAGACA
TGGTGGTTGC CGGCCGAGGT GGAGAAACGC CGAGCAACGT ACTTTGAAGC GATGTCGCAA
ATCGCCTGCG AGAATGGCCT GCCCGCCAGC TTGCTGGATG CAGTTGTTGC CCAAGAGTCA
GGATACAAGG CTTGGGCAAT CAGCAGGGCC GGCGCAATGG GAATGATGCA GGTTATGCCC
GGAACCGCCA GGCATCTGGA GCTATGGAAC CCTTGGGACG CCTTGGCGAA CATGCGCGCG
GGCGCGCGAT ATCTTCGCCA GCAACTTGAT CGTTTTGAAC GCGTCGATCT CGCCCTGGCC
GCCTACAATG CCGGACCAGA GCGCCGCTCC CTCACGCTGG GCTATATCCC AGCGATCCCC
GAAACCCGCA ATTACGTGCG AACCATCACA ACCAACTGGC TCCGCCTTAC CCAGCTCAAT
CGTCCAGATT CCAGCTCTCT TGCGCGAGCG ACAGCAGCCA GCACAGCCGT CTGGGCATCA
GGCTACCGCG AGGTTTCATT GGTCACCTAC GACGGGACGA ATTCCGCAAA CCCGATATAG
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| Protein sequence | MSRFAPSAIA ASGGDGPVEV ALRAHLQGIS QPVYIIDKIG KGASASQNPL SCPGNGYLQT
WWLPAEVEKR RATYFEAMSQ IACENGLPAS LLDAVVAQES GYKAWAISRA GAMGMMQVMP
GTARHLELWN PWDALANMRA GARYLRQQLD RFERVDLALA AYNAGPERRS LTLGYIPAIP
ETRNYVRTIT TNWLRLTQLN RPDSSSLARA TAASTAVWAS GYREVSLVTY DGTNSANPI
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