Gene Saro_4002 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_4002 
Symbol 
ID5077532 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_009426 
Strand- 
Start bp169840 
End bp170535 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content66% 
IMG OID640481107 
Producthypothetical protein 
Protein accessionYP_001165769 
Protein GI146275608 
COG category 
COG ID 
TIGRFAM ID[TIGR02743] type-F conjugative transfer system protein TraW 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.760813 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGGCCCT TCGCCGCCCT GATCGCCGCA AGCGGCCTTG CCCTGCTGGT CGGTTGGCCG 
GGCATCTCGG GCCTGCGTGC TGCCGACTAT GGGCAGATGG GTCAGACCTT TCCGATCATC 
GAGACCGATC TTCTCACCAC GATCGAGACG CGGCTGAGGA CGCTCGAGGC CAATGGCGGG 
ATCGAGCGCA TGCAGCGCCA GATGCAGGAA CAAGCGGTCG CCAGCGTGCG CCGTCCCAAG 
CCGGTCGATG GCATGACCCC CGCAAGCGTC AAGCGCGAAT GGCTGTTCGA TCCCTCGATC 
GTCACGGAAG ACGACATCGT CGATGCCAAG GGCAACCTGA TCGCCGCGCG CGGCACCCGG 
GTCAATCCGC TCGACATGGT GCAATTGAGC CAGGCGCTGG TCTTCGTCGA TGGTGACAAT 
GCGGCCGAGC TGGCCTGGGC GGTGAAAACC TGGAGCGATG CGCGGGCCAA GATCATCTTT 
GTCTCGGGCT CGCCGTTCGA TGCGATGAAG CCTTGGCAGC GGCGCTTCTA CTTCGACCAG 
GGCGGCACGC TCACCGCCAA GTTCGGCATC CGCCACACCC CCGCCGTGGT CTCGGCAGCG 
GGCGCAAATC TCAAGATCAG CGAAGTGCCG CTACCGCCCG CGGCAGCCGC GCCCGCACGC 
GCACCCGTTC TCTCTGGCGG AGGCAAGGTG TCATGA
 
Protein sequence
MRPFAALIAA SGLALLVGWP GISGLRAADY GQMGQTFPII ETDLLTTIET RLRTLEANGG 
IERMQRQMQE QAVASVRRPK PVDGMTPASV KREWLFDPSI VTEDDIVDAK GNLIAARGTR 
VNPLDMVQLS QALVFVDGDN AAELAWAVKT WSDARAKIIF VSGSPFDAMK PWQRRFYFDQ 
GGTLTAKFGI RHTPAVVSAA GANLKISEVP LPPAAAAPAR APVLSGGGKV S